Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035250 | Potato | cytosol | 88.49 | 96.68 |
| VIT_11s0065g00030.t01 | Wine grape | cytosol | 73.28 | 73.09 |
| KRG92127 | Soybean | cytosol | 70.63 | 69.71 |
| KRH41389 | Soybean | cytosol | 69.05 | 68.41 |
| Solyc12g006530.1.1 | Tomato | cytosol | 60.19 | 59.79 |
| Solyc12g006520.1.1 | Tomato | cytosol | 54.76 | 59.31 |
| Solyc12g006510.1.1 | Tomato | cytosol | 57.94 | 58.09 |
| Solyc05g047580.2.1 | Tomato | cytosol | 53.44 | 55.27 |
| Solyc12g035450.1.1 | Tomato | cytosol, plasma membrane, plastid | 12.43 | 54.65 |
| Solyc12g035460.1.1 | Tomato | cytosol | 15.74 | 52.89 |
| Solyc04g070980.2.1 | Tomato | plastid | 53.04 | 52.76 |
| Solyc04g050670.1.1 | Tomato | cytosol | 11.24 | 52.47 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 52.12 | 52.05 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 51.45 | 51.25 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 51.45 | 51.25 |
| EES13537 | Sorghum | cytosol | 51.45 | 51.05 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 48.68 | 49.93 |
| Os08t0223900-00 | Rice | cytosol | 51.72 | 49.81 |
| Zm00001d024337_P001 | Maize | cytosol | 47.49 | 49.65 |
| Solyc12g035440.1.1 | Tomato | cytosol | 5.16 | 44.83 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 | GO:GO:0016866 |
| UniProt:K4CEC4 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF19 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | EnsemblPlantsGene:Solyc07g042630.2 | EnsemblPlants:Solyc07g042630.2.1 | InterPro:Squalene_cyclase |
| TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000276C000 | : | : |
Description
Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:K4CEC4]
Coordinates
chr7:-:56098332..56108664
Molecular Weight (calculated)
87135.9 Da
IEP (calculated)
6.760
GRAVY (calculated)
-0.394
Length
756 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKTAQGE GLWLTSSNNY IGRQHWEYDE EGGTLQERAI VDEMRQNFTK NRFLHKQSSD LLMRMQVRKE NGCVEIGGEV KLEESEDVRE EAVKIRLRKS
101: ISYYSTIQAH DGHWPAESAG PLFFLPPLVM ALYVTGDMNV VLSPAHQMEI KRYTYNHQNE DGGWGFHIEG HSTMFGTVFN YVALRLLGEY CENNNALDKG
201: RKWILHHTGA IATPSWGKFW LAVLGVYEWD GCNPMPPEFW IMPTLFPIHP GKMLCYARLV YMPMSYLYGK RFVGRITSLV QTIRDEIYIQ PYHQIDWNKA
301: RNTCAKEDLY YPHPFIQDTL WGFLHHFAEP MLKRWPFNKL REKALKVAME HIHYEDQTSR YICIGCVEKV LCLMACWVED PNSEAYKRHL ARLPDYYWIS
401: EDGLKFQSFG CQTWDAVFSI QAILSSDVAE EFGPTLKKAN NFLKASQVRE NPSGDFKKMY RHISKGGWPF SMQDHGWQVS DCTSEGLKCA LLFSQMPTQL
501: VGEKLDVERL YDAVNVILSL QSENGGFPAW EPQHAYRWLE KFNPTEFFED TIIEREYVEC TSSSIQALSL FKKLHPGHRR KEIDVAITKG LQYIENTQNP
601: DGSWTGCWGI CYTYGTWFAV DGLIACGRTY STSHALQKAC QFLLSKQLLD GGWGESYLSN SNKVYTNIEG DKSNLVQTSW ALLALINAGQ GEIDPSPIHC
701: GIRLLMNSQM EDGDYPQQGV TGAFMKNCTL NYASYRNIFP IWALAQYHKR LLNKLN
101: ISYYSTIQAH DGHWPAESAG PLFFLPPLVM ALYVTGDMNV VLSPAHQMEI KRYTYNHQNE DGGWGFHIEG HSTMFGTVFN YVALRLLGEY CENNNALDKG
201: RKWILHHTGA IATPSWGKFW LAVLGVYEWD GCNPMPPEFW IMPTLFPIHP GKMLCYARLV YMPMSYLYGK RFVGRITSLV QTIRDEIYIQ PYHQIDWNKA
301: RNTCAKEDLY YPHPFIQDTL WGFLHHFAEP MLKRWPFNKL REKALKVAME HIHYEDQTSR YICIGCVEKV LCLMACWVED PNSEAYKRHL ARLPDYYWIS
401: EDGLKFQSFG CQTWDAVFSI QAILSSDVAE EFGPTLKKAN NFLKASQVRE NPSGDFKKMY RHISKGGWPF SMQDHGWQVS DCTSEGLKCA LLFSQMPTQL
501: VGEKLDVERL YDAVNVILSL QSENGGFPAW EPQHAYRWLE KFNPTEFFED TIIEREYVEC TSSSIQALSL FKKLHPGHRR KEIDVAITKG LQYIENTQNP
601: DGSWTGCWGI CYTYGTWFAV DGLIACGRTY STSHALQKAC QFLLSKQLLD GGWGESYLSN SNKVYTNIEG DKSNLVQTSW ALLALINAGQ GEIDPSPIHC
701: GIRLLMNSQM EDGDYPQQGV TGAFMKNCTL NYASYRNIFP IWALAQYHKR LLNKLN
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.