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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0065g00640.t01 Wine grape cytosol 73.46 15.66
KRH74134 Soybean endoplasmic reticulum 71.6 15.32
CDX85104 Canola cytosol 72.22 15.31
AT2G07050.1 Thale cress cytosol 70.99 15.15
Solyc04g070980.2.1 Tomato plastid 70.99 15.13
Bra013167.1-P Field mustard cytosol 70.37 14.86
CDX93093 Canola cytosol 70.37 14.84
CDY50938 Canola cytosol 69.75 14.81
CDX77512 Canola cytosol 70.99 14.8
TraesCS5A01G005900.1 Wheat cytosol, golgi, mitochondrion, plastid 56.17 14.29
EES06259 Sorghum cytosol 66.67 14.27
TraesCS6B01G139000.1 Wheat golgi 66.67 14.21
TraesCS6A01G110800.1 Wheat cytosol, golgi 66.67 14.21
Zm00001d053889_P004 Maize cytosol 65.43 13.95
Zm00001d015234_P002 Maize cytosol 65.43 13.91
EES06258 Sorghum cytosol 64.2 13.67
HORVU6Hr1G019840.10 Barley mitochondrion 66.67 13.65
Bra014952.1-P Field mustard cytosol 70.99 13.63
TraesCS6B01G138500.1 Wheat cytosol 60.49 13.61
Os02t0139700-01 Rice cytosol 63.58 13.57
TraesCS6D01G099400.2 Wheat cytosol 66.67 13.57
TraesCS2D01G387000.1 Wheat cytosol, plastid 62.35 13.05
TraesCS6A01G110200.1 Wheat mitochondrion 59.88 12.86
TraesCS6D01G098800.1 Wheat mitochondrion 58.64 12.42
Solyc05g047580.2.1 Tomato cytosol 54.94 12.18
TraesCS5D01G011800.1 Wheat mitochondrion 55.56 11.86
TraesCS5A01G004900.1 Wheat mitochondrion 55.56 11.86
TraesCS5D01G006700.1 Wheat cytosol 54.94 11.71
TraesCS5D01G006600.1 Wheat cytosol 54.94 11.71
TraesCS6D01G098600.1 Wheat cytosol 61.11 11.66
TraesCS6A01G110300.1 Wheat cytosol, mitochondrion, peroxisome, plastid 53.7 11.49
Solyc12g006520.1.1 Tomato cytosol 49.38 11.46
Solyc07g042630.2.1 Tomato cytosol 52.47 11.24
TraesCS2B01G407300.1 Wheat cytosol 30.25 11.11
TraesCS5B01G004800.1 Wheat cytosol 50.62 11.04
Zm00001d008671_P001 Maize cytosol 35.19 10.75
Solyc12g006530.1.1 Tomato cytosol 50.0 10.64
Solyc12g006510.1.1 Tomato cytosol 48.77 10.48
Zm00001d008674_P001 Maize mitochondrion 33.33 10.42
Solyc12g035460.1.1 Tomato cytosol 10.49 7.56
Os02t0139500-02 Rice cytosol 14.81 6.78
Solyc12g035450.1.1 Tomato cytosol, plasma membrane, plastid 4.32 4.07
Solyc12g035440.1.1 Tomato cytosol 0.62 1.15
GSMUA_Achr7P15800_001 Banana cytosol, mitochondrion 0.0 0.0
EES08419 Sorghum cytosol, mitochondrion, plastid 0.0 0.0
TraesCS2B01G407200.1 Wheat cytosol 0.0 0.0
KXG29303 Sorghum cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc04g050670.1.1EnsemblPlantsGene:Solyc04g050670.1Gene3D:1.50.10.20InterPro:Terpenoid_cyclase/PrenylTrfasePANTHER:PTHR11764PANTHER:PTHR11764:SF27
SUPFAM:SSF48239UniParc:UPI0002766DB4UniProt:K4BS31MapMan:35.1::
Description
No Description!
Coordinates
chr4:-:47999376..48001029
Molecular Weight (calculated)
18335.6 Da
IEP (calculated)
4.246
GRAVY (calculated)
-0.314
Length
162 amino acids
Sequence
(BLAST)
001: MLCCWVEDSN SEALKLHLPR LYDYLWIAED GMKMQSKDDV NAKFQGYNGS QSWDTSFAIQ AIISTDLVEE YGPTLRKAHT FMKDSQVLDD FPDHGWPISD
101: CSAEGLKACL LLSKLSVEIV DEPLKANRLY DAVNVMLSLQ NPDGGNGTYE LSRSYPWLEV FN
Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.