Factsheet for TraesCS2B01G407300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01250.t01	Wine grape	cytosol	37.41	55.56
VIT_04s0008g03000.t01	Wine grape	cytosol	36.96	53.09
TraesCS6B01G139000.1	Wheat	golgi	81.41	47.24
VIT_09s0054g01180.t01	Wine grape	cytosol	64.4	44.17
KRH74134	Soybean	endoplasmic reticulum	72.34	42.14
AT2G07050.1	Thale cress	cytosol	71.2	41.37
VIT_11s0065g00640.t01	Wine grape	cytosol	71.2	41.32
TraesCS6B01G138500.1	Wheat	cytosol	66.89	40.97
CDY50938	Canola	cytosol	70.07	40.5
VIT_09s0054g01120.t01	Wine grape	cytosol	64.85	40.17
Bra013167.1-P	Field mustard	cytosol	69.84	40.16
CDX93093	Canola	cytosol	69.84	40.1
VIT_09s0018g00630.t01	Wine grape	cytosol	68.48	39.84
CDX77512	Canola	cytosol	69.61	39.51
VIT_09s0054g01550.t01	Wine grape	cytosol	67.8	39.45
CDX85104	Canola	cytosol	67.57	39.01
VIT_09s0054g01110.t01	Wine grape	cytosol	70.07	38.82
TraesCS5B01G004800.1	Wheat	cytosol	64.85	38.49
Solyc04g070980.2.1	Tomato	plastid	65.99	38.29
GSMUA_Achr7P15790_001	Banana	cytosol	51.7	37.56
TraesCS5B01G545900.1	Wheat	cytosol	59.64	35.98
Bra014952.1-P	Field mustard	cytosol	64.85	33.89
TraesCS7B01G131400.1	Wheat	mitochondrion	56.69	33.29
TraesCS6B01G139500.1	Wheat	mitochondrion	57.14	32.81
CDY29789	Canola	cytosol	7.26	32.65
TraesCS2B01G049300.2	Wheat	mitochondrion	55.33	32.32
TraesCS4B01G390800.1	Wheat	mitochondrion	54.88	32.14
VIT_09s0054g01090.t01	Wine grape	cytosol	68.71	31.93
Solyc04g050670.1.1	Tomato	cytosol	11.11	30.25
TraesCS4B01G390900.1	Wheat	extracellular, plasma membrane	41.04	27.76
PGSC0003DMT400073861	Potato	mitochondrion	29.25	26.17
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	24.49	25.12
PGSC0003DMT400062376	Potato	extracellular, vacuole	8.39	19.17
VIT_04s0008g02980.t01	Wine grape	mitochondrion	2.95	8.33
VIT_04s0008g02990.t01	Wine grape	cytosol	0.68	3.19
PGSC0003DMT400048787	Potato	cytosol	0.0	0.0
TraesCS2B01G407200.1	Wheat	cytosol	0.0	0.0
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS2B01G407300.1	EnsemblPlantsGene:TraesCS2B01G407300	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	PFAM:PF13249
SEG:seg	SUPFAM:SSF48239	TIGRFAMs:TIGR01787	MapMan:9.1.4.3	:	:

Description

No Description!

Coordinates

chr2B:-:577213219..577239183

Molecular Weight (calculated)

50619.6 Da

IEP (calculated)

5.833

GRAVY (calculated)

-0.300

Length

441 amino acids

Sequence
(BLAST)

001: MWRLRIAEGG DDPWLRTTNG YLGRQVWEFD ASVEPDPEEV AAVEAARQGF VARRHQLKHS ADLVMRNQFA KANPLELDLL AVKLEEREDV TEEVVSTTLK
101: RAISRLSTLQ AHDGHWPGDY GGPMFLMPGL IITLYVTGAL NTVLSSEHQI EIRRYLYNHQ NGDGGWGLHI EGPSTMFGSA LTYVSLRLLG EGTDSGYGAM
201: EKDRNWILDH GGATFVPSWG KFWLSVLGVF DWSGNNPVPP EAWLLPYCLP FHPGRMWCHC RMVYLPMCYI YGKRFVGQVT PLVLELRKEL YKGPYNEIDW
301: DKTRNQCAKE DLYYPHPFVQ DILWATLHKF VEPLMMHWPG SKLREKALET AMKHIHYEDE NTRYICIGPV NKVMNMLACW IEDQNSEAFK LHIPRVYDYL
401: WIAEDGMKMQ GYNGSQLWDT TFTVQAIVAA NLIEEFGPTL N

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.