Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g01200.t01 | Wine grape | cytosol | 10.12 | 95.05 |
| VIT_09s0018g00630.t01 | Wine grape | cytosol | 70.92 | 88.79 |
| VIT_09s0054g01180.t01 | Wine grape | cytosol | 60.06 | 88.65 |
| VIT_09s0054g01550.t01 | Wine grape | cytosol | 70.6 | 88.39 |
| VIT_09s0054g01120.t01 | Wine grape | cytosol | 66.28 | 88.34 |
| VIT_09s0054g01110.t01 | Wine grape | cytosol | 72.18 | 86.06 |
| VIT_09s0054g01250.t01 | Wine grape | cytosol | 26.03 | 83.17 |
| VIT_11s0065g00640.t01 | Wine grape | cytosol | 63.01 | 78.68 |
| VIT_10s0116g01060.t01 | Wine grape | cytosol | 7.06 | 75.28 |
| EES06259 | Sorghum | cytosol | 59.54 | 74.64 |
| Os02t0139700-01 | Rice | cytosol | 59.43 | 74.31 |
| TraesCS6A01G110800.1 | Wheat | cytosol, golgi | 58.38 | 72.89 |
| TraesCS6B01G139000.1 | Wheat | golgi | 58.17 | 72.63 |
| EES06258 | Sorghum | cytosol | 57.74 | 72.01 |
| Zm00001d015234_P002 | Maize | cytosol | 57.43 | 71.52 |
| Zm00001d053889_P004 | Maize | cytosol | 57.01 | 71.18 |
| TraesCS2B01G407200.1 | Wheat | cytosol | 5.58 | 70.67 |
| TraesCS6D01G099400.2 | Wheat | cytosol | 58.48 | 69.72 |
| KXG29303 | Sorghum | cytosol | 6.01 | 69.51 |
| Os02t0139500-02 | Rice | cytosol | 25.92 | 69.49 |
| TraesCS2B01G407300.1 | Wheat | cytosol | 31.93 | 68.71 |
| HORVU6Hr1G019840.10 | Barley | mitochondrion | 56.69 | 68.02 |
| TraesCS2D01G387000.1 | Wheat | cytosol, plastid | 55.32 | 67.83 |
| TraesCS6B01G138500.1 | Wheat | cytosol | 50.58 | 66.67 |
| VIT_10s0116g01050.t01 | Wine grape | cytosol, nucleus, peroxisome | 18.34 | 66.41 |
| TraesCS6A01G110200.1 | Wheat | mitochondrion | 52.69 | 66.31 |
| TraesCS6D01G098800.1 | Wheat | mitochondrion | 53.11 | 65.88 |
| TraesCS5D01G011800.1 | Wheat | mitochondrion | 50.16 | 62.71 |
| TraesCS5A01G004900.1 | Wheat | mitochondrion | 50.16 | 62.71 |
| VIT_11s0065g00030.t01 | Wine grape | cytosol | 49.53 | 62.01 |
| TraesCS6A01G110300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 49.42 | 61.96 |
| VIT_10s0116g01070.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 10.75 | 61.82 |
| TraesCS5D01G006600.1 | Wheat | cytosol | 49.21 | 61.45 |
| TraesCS5D01G006700.1 | Wheat | cytosol | 49.0 | 61.18 |
| TraesCS5A01G005900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 40.89 | 60.91 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 12.75 | 60.8 |
| TraesCS6D01G098600.1 | Wheat | cytosol | 53.85 | 60.19 |
| GSMUA_Achr7P15800_001 | Banana | cytosol, mitochondrion | 11.17 | 59.89 |
| Zm00001d008674_P001 | Maize | mitochondrion | 32.46 | 59.46 |
| Zm00001d008671_P001 | Maize | cytosol | 32.98 | 59.06 |
| TraesCS5B01G004800.1 | Wheat | cytosol | 46.05 | 58.82 |
| VIT_11s0065g00050.t01 | Wine grape | cytosol, golgi, nucleus | 4.11 | 58.21 |
| VIT_09s0054g01220.t01 | Wine grape | cytosol | 46.15 | 57.86 |
| VIT_09s0054g01160.t01 | Wine grape | extracellular | 6.11 | 57.43 |
| VIT_16s0115g00510.t01 | Wine grape | cytosol, extracellular, plastid | 4.11 | 57.35 |
| VIT_09s0054g01470.t01 | Wine grape | cytosol | 23.5 | 56.6 |
| VIT_09s0054g01390.t01 | Wine grape | cytosol | 45.63 | 56.45 |
| VIT_09s0054g01360.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 30.24 | 56.05 |
| VIT_09s0054g01410.t01 | Wine grape | cytosol | 45.31 | 55.92 |
| VIT_09s0054g01330.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 4.0 | 55.88 |
| VIT_09s0054g01500.t01 | Wine grape | cytosol | 5.8 | 55.0 |
| VIT_09s0054g01210.t01 | Wine grape | cytosol | 43.84 | 54.95 |
| VIT_09s0054g01230.t01 | Wine grape | cytosol | 44.47 | 54.88 |
| VIT_10s0003g03530.t01 | Wine grape | cytosol | 41.31 | 53.99 |
| VIT_10s0003g03650.t01 | Wine grape | cytosol | 42.99 | 53.75 |
| VIT_10s0003g03560.t01 | Wine grape | cytosol, peroxisome, plastid | 15.49 | 53.45 |
| VIT_10s0003g03600.t01 | Wine grape | cytosol, nucleus, plasma membrane | 16.54 | 53.22 |
| VIT_04s0008g03000.t01 | Wine grape | cytosol | 16.75 | 51.79 |
| VIT_09s0054g01340.t01 | Wine grape | cytosol | 22.55 | 51.69 |
| VIT_09s0054g01370.t01 | Wine grape | cytosol | 7.27 | 51.49 |
| VIT_10s0003g03520.t01 | Wine grape | cytosol | 40.78 | 51.39 |
| VIT_09s0054g01140.t01 | Wine grape | extracellular | 10.64 | 51.01 |
| VIT_10s0003g03660.t01 | Wine grape | cytosol | 42.04 | 50.44 |
| VIT_09s0054g01520.t01 | Wine grape | cytosol | 45.84 | 50.06 |
| VIT_00s0208g00080.t01 | Wine grape | cytosol, endoplasmic reticulum, golgi | 3.37 | 50.0 |
| VIT_10s0003g03570.t01 | Wine grape | cytosol | 7.59 | 50.0 |
| VIT_10s0003g03610.t01 | Wine grape | cytosol | 14.86 | 50.0 |
| VIT_04s0008g02980.t01 | Wine grape | mitochondrion | 8.11 | 49.36 |
| VIT_09s0054g01130.t01 | Wine grape | cytosol | 9.69 | 49.2 |
| VIT_09s0054g01170.t01 | Wine grape | cytosol | 2.32 | 48.89 |
| VIT_10s0003g03590.t01 | Wine grape | cytosol, mitochondrion | 5.69 | 47.79 |
| VIT_09s0054g01290.t01 | Wine grape | cytosol | 6.43 | 47.29 |
| VIT_09s0054g01480.t01 | Wine grape | cytosol | 20.55 | 46.43 |
| VIT_04s0008g02990.t01 | Wine grape | cytosol | 4.53 | 45.74 |
| VIT_10s0003g03540.t01 | Wine grape | cytosol | 10.64 | 45.29 |
| VIT_09s0054g01280.t01 | Wine grape | cytosol | 16.23 | 43.38 |
| VIT_09s0054g01420.t01 | Wine grape | cytosol, extracellular, golgi | 4.95 | 43.12 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.43 | 42.0 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | MapMan:9.1.5.3 | ProteinID:CCB45041 | ProteinID:CCB45041.1 | UniProt:F6GYK5 |
| EMBL:FN594972 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016866 | PFAM:PF03732 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF27 | InterPro:Retrotrans_gag_dom | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | SUPFAM:SSF48239 | InterPro:Squalene_cyclase |
| TIGR:TC70302 | TIGRFAMs:TIGR01787 | TMHMM:TMhelix | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00021097BB |
| ArrayExpress:VIT_09s0054g01090 | EnsemblPlantsGene:VIT_09s0054g01090 | EnsemblPlants:VIT_09s0054g01090.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr9:+:21929409..21952630
Molecular Weight (calculated)
108289.0 Da
IEP (calculated)
6.198
GRAVY (calculated)
-0.314
Length
949 amino acids
Sequence
(BLAST)
(BLAST)
001: MWKLKVAEGD DPWLRTLNGH VGRQVWEFDP HLGTQEERNQ VDEARRSFAD LRFEKKHSSD LLMRMQFARE NPCVANLPQI KVQDLKEVTE EVVTTTLRRG
101: LNFYSTIQAH DGHWPGDYGG PMFLLPGLVI TLYITGALNV VLSIEHQREM CRYLFNHQNE DGGWGLHIEG PSTMFGTVLS YVTLRLLGEG RFGAEGVMEK
201: GRKWILDHGG ATAITSWGKM WLSVLGAYEW SGNNPLPPEV WLCPYILPIH PGRMWCHCRM VYLPMSYIYG KRFVGPITPT IISLRKELSE IPNLGGNDSS
301: PILITGHKLN GHNYLQWSQS VLLFICGKGK DEYLTGEAVM PETTEPGFRK WKIENSMIMS WLINSMNNDI GENFLLFGTA KDIWDAAKET YSSSENTSEL
401: FQVESALHDF RQGEQSVTQY YNTLTRYWQQ LDLFETHSWK CSDDAATYRQ IVEQKRLFKF FLGLNRELDD VRGRIMGIKP LPSLREAFSE VRREESRKKE
501: DLYYPHSLVQ DILWASLHKV LEPILGHWPG NKLREKALCT VMQHVHYEDE NTRYICIGPV NKVLNMLCCW IEDPNSEAFK LHIPRIFDYL WIAEDGMKMQ
601: GYNGSQLWDT CFAVQAIIST NLGGEYGLTL RKAHEFIKNS QVLEDCPGDL KFWYRHISKG AWPFSTADHG WPISDCTAEG LKAVLLLSKL SLETVGEPLD
701: MEQLFDAVNV ILSLQNADGG FATYELTRSY RWVELINPAE TFGDIVIDYP YAECTSAAIQ ALTSFKKLYP EHRRHEIENC ISKAAKFIED IQAPDGSWYG
801: SWGVCFTYGG WFGIKGLIAA GNTYSNCPCI RKACDYLLSK ELGSGGWGES YLSCQNKVYT NLPGDKPHNV NTAWAMLALI DAGQAERDAN PLHRAARVLI
901: NSQMKNGDFP QEEIMGVFNK NCMISYSTYR NIFPIWALGE YQSRVLHSS
101: LNFYSTIQAH DGHWPGDYGG PMFLLPGLVI TLYITGALNV VLSIEHQREM CRYLFNHQNE DGGWGLHIEG PSTMFGTVLS YVTLRLLGEG RFGAEGVMEK
201: GRKWILDHGG ATAITSWGKM WLSVLGAYEW SGNNPLPPEV WLCPYILPIH PGRMWCHCRM VYLPMSYIYG KRFVGPITPT IISLRKELSE IPNLGGNDSS
301: PILITGHKLN GHNYLQWSQS VLLFICGKGK DEYLTGEAVM PETTEPGFRK WKIENSMIMS WLINSMNNDI GENFLLFGTA KDIWDAAKET YSSSENTSEL
401: FQVESALHDF RQGEQSVTQY YNTLTRYWQQ LDLFETHSWK CSDDAATYRQ IVEQKRLFKF FLGLNRELDD VRGRIMGIKP LPSLREAFSE VRREESRKKE
501: DLYYPHSLVQ DILWASLHKV LEPILGHWPG NKLREKALCT VMQHVHYEDE NTRYICIGPV NKVLNMLCCW IEDPNSEAFK LHIPRIFDYL WIAEDGMKMQ
601: GYNGSQLWDT CFAVQAIIST NLGGEYGLTL RKAHEFIKNS QVLEDCPGDL KFWYRHISKG AWPFSTADHG WPISDCTAEG LKAVLLLSKL SLETVGEPLD
701: MEQLFDAVNV ILSLQNADGG FATYELTRSY RWVELINPAE TFGDIVIDYP YAECTSAAIQ ALTSFKKLYP EHRRHEIENC ISKAAKFIED IQAPDGSWYG
801: SWGVCFTYGG WFGIKGLIAA GNTYSNCPCI RKACDYLLSK ELGSGGWGES YLSCQNKVYT NLPGDKPHNV NTAWAMLALI DAGQAERDAN PLHRAARVLI
901: NSQMKNGDFP QEEIMGVFNK NCMISYSTYR NIFPIWALGE YQSRVLHSS
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.