Factsheet for VIT_09s0054g01110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01200.t01	Wine grape	cytosol	12.31	97.03
VIT_09s0054g01180.t01	Wine grape	cytosol	76.38	94.56
VIT_09s0018g00630.t01	Wine grape	cytosol	89.82	94.33
VIT_09s0054g01120.t01	Wine grape	cytosol	83.79	93.68
VIT_09s0054g01550.t01	Wine grape	cytosol	87.69	92.08
VIT_09s0054g01250.t01	Wine grape	cytosol	32.16	86.2
VIT_11s0065g00640.t01	Wine grape	cytosol	74.87	78.42
VIT_09s0054g01500.t01	Wine grape	cytosol	9.55	76.0
VIT_10s0116g01060.t01	Wine grape	cytosol	8.42	75.28
Os02t0139700-01	Rice	cytosol	70.23	73.65
EES06259	Sorghum	cytosol	69.85	73.45
TraesCS6B01G139000.1	Wheat	golgi	68.97	72.24
TraesCS6A01G110800.1	Wheat	cytosol, golgi	68.97	72.24
VIT_09s0054g01090.t01	Wine grape	cytosol	86.06	72.18
TraesCS2B01G407200.1	Wheat	cytosol	6.78	72.0
EES06258	Sorghum	cytosol	68.22	71.35
Os02t0139500-02	Rice	cytosol	31.53	70.9
Zm00001d015234_P002	Maize	cytosol	67.71	70.73
Zm00001d053889_P004	Maize	cytosol	67.21	70.39
TraesCS2B01G407300.1	Wheat	cytosol	38.82	70.07
KXG29303	Sorghum	cytosol	7.16	69.51
TraesCS6D01G099400.2	Wheat	cytosol	69.1	69.1
HORVU6Hr1G019840.10	Barley	mitochondrion	67.59	68.02
TraesCS2D01G387000.1	Wheat	cytosol, plastid	66.08	67.96
VIT_09s0054g01370.t01	Wine grape	cytosol	11.43	67.91
TraesCS6B01G138500.1	Wheat	cytosol	60.93	67.36
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	21.73	66.03
TraesCS6A01G110200.1	Wheat	mitochondrion	62.44	65.92
TraesCS6D01G098800.1	Wheat	mitochondrion	63.07	65.62
TraesCS5D01G011800.1	Wheat	mitochondrion	60.18	63.11
TraesCS5A01G004900.1	Wheat	mitochondrion	60.05	62.98
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.28	62.69
VIT_11s0065g00030.t01	Wine grape	cytosol	59.55	62.53
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	12.81	61.82
TraesCS5D01G006600.1	Wheat	cytosol	58.79	61.58
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	58.54	61.56
TraesCS5D01G006700.1	Wheat	cytosol	58.42	61.18
VIT_09s0054g01220.t01	Wine grape	cytosol	58.17	61.16
Zm00001d008674_P001	Maize	mitochondrion	39.7	61.0
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	48.74	60.91
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	13.44	60.45
TraesCS6D01G098600.1	Wheat	cytosol	63.94	59.95
Zm00001d008671_P001	Maize	cytosol	39.7	59.62
EES08419	Sorghum	cytosol, mitochondrion, plastid	14.82	59.3
VIT_09s0054g01390.t01	Wine grape	cytosol	56.91	59.06
TraesCS5B01G004800.1	Wheat	cytosol	55.03	58.95
VIT_09s0054g01130.t01	Wine grape	cytosol	13.82	58.82
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	5.03	58.82
VIT_09s0054g01410.t01	Wine grape	cytosol	56.28	58.26
VIT_09s0054g01230.t01	Wine grape	cytosol	55.65	57.61
VIT_09s0054g01210.t01	Wine grape	cytosol	54.65	57.46
VIT_09s0054g01160.t01	Wine grape	extracellular	7.16	56.44
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	36.18	56.25
VIT_04s0008g03000.t01	Wine grape	cytosol	21.48	55.7
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	20.6	55.59
VIT_09s0054g01470.t01	Wine grape	cytosol	27.51	55.58
VIT_10s0003g03530.t01	Wine grape	cytosol	50.25	55.1
VIT_10s0003g03650.t01	Wine grape	cytosol	52.39	54.94
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	18.97	54.91
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	7.79	54.87
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.65	54.41
VIT_10s0003g03570.t01	Wine grape	cytosol	9.67	53.47
VIT_09s0054g01520.t01	Wine grape	cytosol	57.29	52.47
VIT_10s0003g03520.t01	Wine grape	cytosol	49.5	52.32
VIT_09s0054g01140.t01	Wine grape	extracellular	12.94	52.02
VIT_10s0003g03660.t01	Wine grape	cytosol	51.63	51.96
VIT_09s0054g01480.t01	Wine grape	cytosol	27.39	51.9
VIT_10s0003g03610.t01	Wine grape	cytosol	18.22	51.42
VIT_09s0054g01340.t01	Wine grape	cytosol	26.26	50.48
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.67	49.36
VIT_09s0054g01170.t01	Wine grape	cytosol	2.76	48.89
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	3.89	48.44
VIT_04s0008g02990.t01	Wine grape	cytosol	5.4	45.74
VIT_10s0003g03540.t01	Wine grape	cytosol	12.69	45.29
VIT_09s0054g01280.t01	Wine grape	cytosol	19.72	44.23
VIT_09s0054g01290.t01	Wine grape	cytosol	7.16	44.19
VIT_10s0003g03550.t01	Wine grape	extracellular	5.4	43.0
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	5.65	41.28

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	MapMan:9.1.5.3	ProteinID:CCB45039	ProteinID:CCB45039.1	UniProt:F6GYK3
EMBL:FN594972	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016853	GO:GO:0016866	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764
PANTHER:PTHR11764:SF27	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGR:TC56199
TIGRFAMs:TIGR01787	TMHMM:TMhelix	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00021097BA	ArrayExpress:VIT_09s0054g01110
EnsemblPlantsGene:VIT_09s0054g01110	EnsemblPlants:VIT_09s0054g01110.t01	SEG:seg	:	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6GYK3]

Coordinates

chr9:+:21957153..21975876

Molecular Weight (calculated)

90841.8 Da

IEP (calculated)

6.314

GRAVY (calculated)

-0.234

Length

796 amino acids

Sequence
(BLAST)

001: MWRLKVADGG NDPYMYSTNN FVGRQIWEFD PDYGTPEERA EVEAARENFR KNRFPVKPSS DLLWRMQFAR ENPCASNLPQ IKVQDLEEVT EEVVTTTLRR
101: GLNFYSTMQA HDGHWPGDYG GPMFLLPGLV ITLYITGALN VVLSIEHQRE MCKYLFNHQA RFLIVTSLSF YRIQESDDRD IKINYCVPFT IYLASSGIAN
201: GGWGLHIEGP STMFGTVLSY VTLRLLGEGG FGVEGAMEKG RKWILDHGGA TAITSWGKMW LSVLGAYEWS GNNPLPPEVW LCPYILPIHP GRMWCHCRMV
301: YLPMSYIYGK RFVGPITPTI IYLRKELYIV PYQEVDWNKA RNQCAKEDLY YPHPLVQDIL WASLHKVLEP ILGHWPGNKL REKALCTVMQ HVHYEDENTR
401: YICIGPVNKV LNMLCCWIED PNSEAFKLHI PRIFDYLWIA EDGMKMQGYN GSQLWDTCFA VQAIISTNLG EEYGLTLRKA HQFIKNSQVL EDCPGDLKFW
501: YRHISKGAWP FSTADNGWPT SDCTAEGLKV VLLLCKLPLE TVGEPLDMEQ LFDAVNVVLS LQNADGGFAT YELTRSYRWF ELINPAETFG DIVIDYPYVE
601: CTSAAIQALT SFKKLYPEHR RHEIENCISK AAKFIEDRQA PDGSWYGSWG VCFTYGGWFG IKGLIAAGNT YSNCPCIRKA CDYLLSKELG SGGWGESYLS
701: CQNKVYTNLP EDKPHNVNTA WAMLALIDAG QAGRDPNPLH RAARILINSQ MKNGDFPQEE IMGVFNKNCM ISYSAYRNIF PIWALGEYRY RVLHSS

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.