Factsheet for GSMUA_Achr7P15800_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
golgi 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29789	Canola	cytosol	16.95	30.61
VIT_04s0008g03000.t01	Wine grape	cytosol	35.03	20.2
VIT_11s0065g00640.t01	Wine grape	cytosol	63.28	14.74
AT2G07050.1	Thale cress	cytosol	62.15	14.49
KRH74134	Soybean	endoplasmic reticulum	61.58	14.4
CDY50938	Canola	cytosol	61.02	14.15
Bra013167.1-P	Field mustard	cytosol	60.45	13.95
CDX93093	Canola	cytosol	59.89	13.8
VIT_09s0054g01550.t01	Wine grape	cytosol	58.19	13.59
VIT_09s0054g01180.t01	Wine grape	cytosol	49.15	13.53
CDX77512	Canola	cytosol	59.32	13.51
VIT_09s0054g01110.t01	Wine grape	cytosol	60.45	13.44
Solyc04g070980.2.1	Tomato	plastid	56.5	13.16
CDX85104	Canola	cytosol	56.5	13.09
VIT_09s0018g00630.t01	Wine grape	cytosol	55.93	13.06
VIT_09s0054g01120.t01	Wine grape	cytosol	46.33	11.52
VIT_09s0054g01090.t01	Wine grape	cytosol	59.89	11.17
PGSC0003DMT400062376	Potato	extracellular, vacuole	11.3	10.36
Bra014952.1-P	Field mustard	cytosol	48.02	10.07
VIT_04s0008g02980.t01	Wine grape	mitochondrion	5.65	6.41
GSMUA_Achr7P15790_001	Banana	cytosol	3.39	0.99
VIT_04s0008g02990.t01	Wine grape	cytosol	0.0	0.0
Solyc04g050670.1.1	Tomato	cytosol	0.0	0.0
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	0.0	0.0
VIT_09s0054g01250.t01	Wine grape	cytosol	0.0	0.0
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	0.0	0.0
PGSC0003DMT400073861	Potato	mitochondrion	0.0	0.0
PGSC0003DMT400048787	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr7P15800_001	EnsemblPlants:GSMUA_Achr7T15800_001	EnsemblPlantsGene:GSMUA_Achr7G15800_001	Gene3D:1.50.10.20	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	SEG:seg	SUPFAM:SSF48239
TMHMM:TMhelix	UniParc:UPI000295488A	UniProt:M0THW7	MapMan:9.1.4.3	:	:

Description

Cycloartenol synthase [Source:GMGC_GENE;Acc:GSMUA_Achr7G15800_001]

Coordinates

chr7:-:12712462..12714128

Molecular Weight (calculated)

20908.3 Da

IEP (calculated)

7.963

GRAVY (calculated)

-0.354

Length

177 amino acids

Sequence
(BLAST)

001: MWRLKIAEGI GPWLRTNNNH IGRQVWEFDP SLGTPEEIAE VERVREEFRK NRFEKKHSSD LLMRLQFSKE NPLELDFPII KLQDHEDVTE EAVLTSLRRA
101: ISRISTLQAH DGHWPGDYGG PMFLMPGLII TLYVTGALNT VLTPEHQKEI RRYLYNHQAL TFSYFLRIFI LFLFRKL

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.