Factsheet for PGSC0003DMT400077891

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, extracellular

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 3
extracellular 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g02990.t01	Wine grape	cytosol	11.16	51.06
VIT_09s0054g01250.t01	Wine grape	cytosol	26.98	39.06
PGSC0003DMT400043981	Potato	cytosol	49.53	34.92
PGSC0003DMT400051584	Potato	cytosol	58.37	32.98
PGSC0003DMT400073861	Potato	mitochondrion	37.67	32.86
PGSC0003DMT400048795	Potato	cytosol	54.19	31.79
PGSC0003DMT400048796	Potato	cytosol	55.58	31.41
Os02t0139500-02	Rice	cytosol	21.4	25.99
TraesCS2B01G407300.1	Wheat	cytosol	25.12	24.49
TraesCS6B01G138500.1	Wheat	cytosol	37.44	22.36
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	32.33	21.82
TraesCS6A01G110800.1	Wheat	cytosol, golgi	37.67	21.32
TraesCS6B01G139000.1	Wheat	golgi	37.44	21.18
Zm00001d008671_P001	Maize	cytosol	26.05	21.13
Os02t0139700-01	Rice	cytosol	37.21	21.08
TraesCS6A01G110200.1	Wheat	mitochondrion	36.74	20.95
TraesCS6D01G098800.1	Wheat	mitochondrion	37.21	20.91
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	36.51	20.74
EES06259	Sorghum	cytosol	36.28	20.61
Zm00001d015234_P002	Maize	cytosol	36.28	20.47
TraesCS2D01G387000.1	Wheat	cytosol, plastid	36.74	20.41
TraesCS6D01G099400.2	Wheat	cytosol	37.67	20.35
Zm00001d053889_P004	Maize	cytosol	35.81	20.26
HORVU6Hr1G019840.10	Barley	mitochondrion	37.21	20.23
EES06258	Sorghum	cytosol	35.58	20.11
VIT_04s0008g03000.t01	Wine grape	cytosol	13.95	19.54
TraesCS5D01G006600.1	Wheat	cytosol	33.95	19.21
TraesCS5A01G004900.1	Wheat	mitochondrion	33.72	19.1
TraesCS5D01G011800.1	Wheat	mitochondrion	33.49	18.97
TraesCS6D01G098600.1	Wheat	cytosol	37.44	18.96
TraesCS5D01G006700.1	Wheat	cytosol	33.49	18.95
TraesCS5B01G004800.1	Wheat	cytosol	32.33	18.71
PGSC0003DMT400035250	Potato	cytosol	30.0	18.64
VIT_04s0008g02980.t01	Wine grape	mitochondrion	5.58	15.38
Zm00001d008674_P001	Maize	mitochondrion	17.44	14.48
PGSC0003DMT400062376	Potato	extracellular, vacuole	4.42	9.84
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	1.4	8.82
TraesCS2B01G407200.1	Wheat	cytosol	1.4	8.0
KXG29303	Sorghum	cytosol	1.16	6.1
CDY29789	Canola	cytosol	0.47	2.04
EES08419	Sorghum	cytosol, mitochondrion, plastid	0.0	0.0
GSMUA_Achr7P15800_001	Banana	cytosol, mitochondrion	0.0	0.0
PGSC0003DMT400048787	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400077891	EnsemblPlantsGene:PGSC0003DMG400030301	Gene3D:1.50.10.20	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16
PGSC:PGSC0003DMG400030301	SUPFAM:SSF48239	UniParc:UPI000296D600	UniProt:M1CZ12	MapMan:9.1.4.3	:

Description

Cycloartenol synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400030301]

Coordinates

chr12:-:5486783..5489662

Molecular Weight (calculated)

49418.9 Da

IEP (calculated)

8.576

GRAVY (calculated)

-0.115

Length

430 amino acids

Sequence
(BLAST)

001: MVYMPMSYLH GKRFVGPITP LILQLRVELY SQPYDEINWK RVRHLCAKED LYYPHPWVQD LMWDSLNICT EPLLTRWPFN KLRNKALAVT MKHIHYEDEN
101: SRYITIGCVN KVLCMLACWV EGSKWQLFKK HLARIPDYLW VAEDGMKMQS FGSQAWDTSF ANQALLACEM NDEILDTLKK GHDFIKTSQV KDNPSGDFKG
201: MYRHISKGSW TFSDQDHGWQ VSDSTADALK LLNPTELFAD IVIEHEYGSW GVCFTYASWF ALGGLAAAGK SYSNSAAVRK DVEFLLRRLR LIVVGEKATI
301: LVLTRMALGA CQILQKLCIF GRSNMVATNF LESPNNIGHM YSGHASYSIW NHFTPILNIL SQVFYWHAYL PLKKSTKMTG KYNRDLALYL IKQVYRELET
401: EHSNLVQTAW ALMGLIQSGQ VNSLLLLVKA

Best Arabidopsis Sequence Match ( AT1G78955.1 )
(BLAST)

001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS

Arabidopsis Description

CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.