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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g006520.1.1 Tomato cytosol 87.04 91.4
PGSC0003DMT400043981 Potato cytosol 72.71 87.38
PGSC0003DMT400048796 Potato cytosol 89.77 86.47
PGSC0003DMT400051584 Potato cytosol 87.99 84.76
CDY40048 Canola cytosol 8.46 76.54
VIT_09s0054g01220.t01 Wine grape cytosol 77.35 74.9
VIT_09s0054g01390.t01 Wine grape cytosol 76.13 72.75
KRH44692 Soybean endoplasmic reticulum 75.44 72.57
VIT_09s0054g01410.t01 Wine grape cytosol 75.99 72.43
KRH46975 Soybean endoplasmic reticulum 75.17 72.31
VIT_09s0054g01230.t01 Wine grape cytosol 75.31 71.78
VIT_09s0054g01360.t01 Wine grape cytosol, golgi, mitochondrion, plastid 49.8 71.29
KRH66671 Soybean cytosol 73.4 70.6
KRH66676 Soybean cytosol 58.8 68.41
VIT_09s0054g01470.t01 Wine grape cytosol 36.02 67.01
VIT_09s0054g01370.t01 Wine grape cytosol 11.87 64.93
VIT_09s0054g01520.t01 Wine grape cytosol 76.4 64.44
KRH10719 Soybean cytosol 39.97 64.25
VIT_09s0054g01480.t01 Wine grape cytosol 36.7 64.05
KRH11342 Soybean cytosol 60.71 63.94
VIT_09s0054g01340.t01 Wine grape cytosol 35.2 62.32
VIT_09s0054g01280.t01 Wine grape cytosol 30.01 61.97
KRH66677 Soybean cytosol 10.91 58.82
PGSC0003DMT400035250 Potato cytosol 53.07 56.21
PGSC0003DMT400077891 Potato extracellular, golgi, mitochondrion, plastid 31.79 54.19
PGSC0003DMT400073861 Potato mitochondrion 36.29 53.96
TraesCS4A01G495100.1 Wheat cytosol 51.16 49.54
TraesCS7D01G004000.1 Wheat cytosol 50.07 48.35
TraesCS7A01G003500.1 Wheat cytosol 49.93 48.22
EES13537 Sorghum cytosol 48.7 46.85
Os08t0223900-00 Rice cytosol 49.93 46.62
HORVU7Hr1G000400.1 Barley cytosol, plastid 46.79 46.54
Zm00001d024337_P001 Maize cytosol 44.2 44.81
PGSC0003DMT400062376 Potato extracellular, vacuole 9.82 37.31
PGSC0003DMT400048787 Potato cytosol 1.77 22.41
Protein Annotations
Gene3D:1.50.10.20MapMan:9.1.4.3GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0016853GO:GO:0016866UniProt:M1BMW2PFAM:PF13243PFAM:PF13249
EnsemblPlantsGene:PGSC0003DMG401018962PGSC:PGSC0003DMG401018962EnsemblPlants:PGSC0003DMT400048795ScanProsite:PS01074PANTHER:PTHR11764PANTHER:PTHR11764:SF16
InterPro:SQ_cyclase_CInterPro:SQ_cyclase_NSUPFAM:SSF48239InterPro:Squalene_cyclaseTIGRFAMs:TIGR01787TMHMM:TMhelix
InterPro:Terpene_synthase_CSInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI000295A21C:::
Description
Beta-amyrin synthase [Source:PGSC_GENE;Acc:PGSC0003DMG401018962]
Coordinates
chr12:-:5434064..5442021
Molecular Weight (calculated)
83852.1 Da
IEP (calculated)
5.972
GRAVY (calculated)
-0.291
Length
733 amino acids
Sequence
(BLAST)
001: MWKLTIAQGQ DAYLYSTNNY VGRQTWEFDP NSGTAEELAE IEKARQQFWN NHYKIKPNSD LLWRMQFLRE KNFKQRIGAV KVEEGEEISH EIATIALRRA
101: VHFFSALQAT DGHWPAESAG PLFFLPPLVM CMYITGHLNT VFPAEHRKEI LRYIYCHQNE DGGWGLHIEG HSTMFCTALS YVCMRILGEG PDGGVNNACA
201: RARKWILDHG SVIAIPSWGK TWLSILGAFE WIGTNPMPPE FWILPSFLPV HPAKMWCYCR TVYMPMSYLY GKRFVGPITP LILQLREELY DQPYDEINWK
301: KVRHVCAKED LYYPHPLVQD LMWDSLYICT EPLLTRWPFN KLRNKALEVT MKHIHYEDEN SRYITMGCVE KVLSMLACWV EDPNGDHFKK HLARIPDYLW
401: VAEDGMKMQG CGSQSWDASL AIQALLASEM NDEISDTLRK GHDFIKQSQV KDNPSGDFKG MYRHISKGSW AFADQDHGWQ VSDCTAEALT CCLLFSTMPP
501: ELVGEAMDPV RLYDSVNVIL SLQSKNGGLA GWEPAGAAEY LELLNPTEFF EDIVIEHEHV ECTSSAIQAL VRFKKIYPGH RTTEVDNFIN NGVKYIEDVQ
601: KPDGSWYGNW GVCFIYASWF ALGGLAAVGL SYRNCAAVRK GVEFLLRTQR SDGGWGESYR SCPDKVYREL ETEHSNLVQT AWALMGLIHS GQVDRDPRPL
701: HRAAKLLINS QMEDGDFPQQ IITPQIYLCS VLE
Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)
001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP
Arabidopsis Description
Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.