Factsheet for PGSC0003DMT400051584

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
golgi 1
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043981	Potato	cytosol	72.93	90.98
PGSC0003DMT400048796	Potato	cytosol	90.01	90.01
Solyc12g006510.1.1	Tomato	cytosol	88.57	89.39
PGSC0003DMT400048795	Potato	cytosol	84.76	87.99
VIT_09s0054g01220.t01	Wine grape	cytosol	78.45	78.86
VIT_09s0054g01410.t01	Wine grape	cytosol	77.4	76.59
CDY40048	Canola	cytosol	8.15	76.54
VIT_09s0054g01390.t01	Wine grape	cytosol	76.61	76.01
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	50.72	75.39
KRH46975	Soybean	endoplasmic reticulum	75.3	75.2
KRH44692	Soybean	endoplasmic reticulum	74.9	74.8
VIT_09s0054g01230.t01	Wine grape	cytosol	75.43	74.64
KRH66671	Soybean	cytosol	73.59	73.49
VIT_09s0054g01470.t01	Wine grape	cytosol	37.58	72.59
KRH66676	Soybean	cytosol	58.21	70.32
VIT_09s0054g01370.t01	Wine grape	cytosol	11.96	67.91
KRH10719	Soybean	cytosol	40.47	67.54
VIT_09s0054g01340.t01	Wine grape	cytosol	36.66	67.39
PGSC0003DMT400048787	Potato	cytosol	5.12	67.24
VIT_09s0054g01520.t01	Wine grape	cytosol	76.74	67.2
KRH11342	Soybean	cytosol	61.24	66.95
VIT_09s0054g01480.t01	Wine grape	cytosol	35.61	64.52
VIT_09s0054g01280.t01	Wine grape	cytosol	29.04	62.25
KRH66677	Soybean	cytosol	10.91	61.03
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	32.98	58.37
PGSC0003DMT400035250	Potato	cytosol	52.83	58.09
PGSC0003DMT400073861	Potato	mitochondrion	36.27	55.98
TraesCS4A01G495100.1	Wheat	cytosol	51.38	51.65
TraesCS7D01G004000.1	Wheat	cytosol	50.07	50.2
TraesCS7A01G003500.1	Wheat	cytosol	50.07	50.2
EES13537	Sorghum	cytosol	49.93	49.87
Os08t0223900-00	Rice	cytosol	50.72	49.17
HORVU7Hr1G000400.1	Barley	cytosol, plastid	46.91	48.44
Zm00001d024337_P001	Maize	cytosol	45.07	47.44
PGSC0003DMT400062376	Potato	extracellular, vacuole	11.96	47.15

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866
UniProt:M1BRW8	PFAM:PF13243	PFAM:PF13249	EnsemblPlantsGene:PGSC0003DMG400020034	PGSC:PGSC0003DMG400020034	EnsemblPlants:PGSC0003DMT400051584
ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239
InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000294BDCE	:

Description

Beta-amyrin synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400020034]

Coordinates

chr12:-:5624709..5631450

Molecular Weight (calculated)

87368.5 Da

IEP (calculated)

6.475

GRAVY (calculated)

-0.310

Length

761 amino acids

Sequence
(BLAST)

001: MWKLKIAKGQ DDPYLYSTNN YVGRQTWEFD PNAGMKEEHA EIEEARQHFW NNRYKVKPNS DLLWRMQFLR EKNFKQRIGA VKVEEGKEIS HEIATIALRR
101: AVHFFSALQA TDGHWPAENA GPLFFLPPLV MCMYITGHLN TVFPAEHRKE ILRYIYCHQN EDGGWGLHIE GHSTMFCTTL SYICMRILGE GPDGGKNNAC
201: ARARKWILDH GSVTAIPSWG KTWLSILGAF EWLGTNPIPP EFWILPSFLP MNPAKMWCYC RMVYMPMSYL YGKRFIGPIT PLILQLRVEL YNQPYDEINW
301: KRVRHLCAKE DLYYPHPWVQ DLMWDSLNIC TEPLLTRWPF NKLRNKALEV TMKHIHYEDE NSRYITIGCV NKVLCMLACW VEDPNGDYFK KHLARIPDYL
401: WVAEDGMKMQ SFGSQAWDTS FAIQALLASE MNDEILDTLR KGHDFIKTSQ VKDNPSGDFK GMYRHISKGS WTFSDQDHGW QVSDSTAEAL KCCLFFSTMP
501: SELVGEAIEP ARLYDSVDVI LTFQSKNGGL AAWEPAGASQ YLELLNPTEL FADIVIEHEY VECTGASIQA LVLFKKLYPG HRTTEIDNFI DNAVKYLDDV
601: QKPDGSWYGS WGVCFTYASW FALGGLAAAG KSYSNSAAVR KGVEFLLLRQ RSDGGWGESY HSCPDKVYRE LETEHSNLVQ TAWALMGLIH SGQVDRDPRP
701: LHCAARLLIN SQMEDGDFPQ QEITGVVMKN CMLHYAAYKN IFPLWGLAEY CKNVQVPLVH N

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.