Factsheet for VIT_09s0054g01220.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	golgi
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0054g01370.t01	Wine grape	cytosol	16.25	91.79
VIT_09s0054g01390.t01	Wine grape	cytosol	92.21	91.0
VIT_09s0054g01410.t01	Wine grape	cytosol	91.55	90.12
VIT_09s0054g01500.t01	Wine grape	cytosol	11.76	89.0
VIT_09s0054g01360.t01	Wine grape	cytosol, golgi, mitochondrion, plastid	59.97	88.67
VIT_09s0054g01230.t01	Wine grape	cytosol	89.56	88.17
VIT_09s0054g01470.t01	Wine grape	cytosol	44.65	85.79
PGSC0003DMT400048796	Potato	cytosol	82.96	82.52
VIT_09s0054g01340.t01	Wine grape	cytosol	44.65	81.64
VIT_09s0054g01160.t01	Wine grape	extracellular	10.83	81.19
VIT_09s0054g01520.t01	Wine grape	cytosol	92.6	80.67
VIT_09s0054g01210.t01	Wine grape	cytosol	80.58	80.58
PGSC0003DMT400043981	Potato	cytosol	64.2	79.67
VIT_09s0054g01480.t01	Wine grape	cytosol	43.86	79.05
PGSC0003DMT400051584	Potato	cytosol	78.86	78.45
PGSC0003DMT400048795	Potato	cytosol	74.9	77.35
VIT_09s0054g01130.t01	Wine grape	cytosol	18.76	75.94
VIT_09s0054g01140.t01	Wine grape	extracellular	19.55	74.75
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	6.61	73.53
VIT_09s0054g01290.t01	Wine grape	cytosol	12.15	71.32
VIT_09s0054g01280.t01	Wine grape	cytosol	32.1	68.45
VIT_04s0008g03000.t01	Wine grape	cytosol	27.08	66.78
VIT_09s0054g01420.t01	Wine grape	cytosol, extracellular, golgi	9.38	65.14
VIT_04s0008g02990.t01	Wine grape	cytosol	8.06	64.89
Solyc12g035440.1.1	Tomato	cytosol	7.4	64.37
VIT_10s0003g03530.t01	Wine grape	cytosol	61.56	64.19
VIT_11s0065g00030.t01	Wine grape	cytosol	64.2	64.12
VIT_10s0003g03650.t01	Wine grape	cytosol	63.8	63.64
VIT_10s0003g03600.t01	Wine grape	cytosol, nucleus, plasma membrane	24.44	62.71
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	5.55	62.69
VIT_09s0054g01170.t01	Wine grape	cytosol	3.7	62.22
VIT_09s0054g01180.t01	Wine grape	cytosol	52.84	62.21
VIT_10s0003g03520.t01	Wine grape	cytosol	60.9	61.22
VIT_09s0018g00630.t01	Wine grape	cytosol	61.16	61.08
VIT_10s0003g03560.t01	Wine grape	cytosol, peroxisome, plastid	22.06	60.73
VIT_09s0054g01120.t01	Wine grape	cytosol	57.07	60.67
VIT_09s0054g01550.t01	Wine grape	cytosol	60.63	60.55
VIT_10s0003g03660.t01	Wine grape	cytosol	62.62	59.92
VIT_10s0116g01050.t01	Wine grape	cytosol, nucleus, peroxisome	20.48	59.16
VIT_09s0054g01200.t01	Wine grape	cytosol	7.79	58.42
VIT_09s0054g01110.t01	Wine grape	cytosol	61.16	58.17
VIT_11s0065g00640.t01	Wine grape	cytosol	58.26	58.03
VIT_10s0116g01060.t01	Wine grape	cytosol	6.74	57.3
VIT_10s0003g03570.t01	Wine grape	cytosol	10.83	56.94
VIT_10s0003g03610.t01	Wine grape	cytosol	21.14	56.74
VIT_04s0008g02980.t01	Wine grape	mitochondrion	11.62	56.41
VIT_10s0003g03590.t01	Wine grape	cytosol, mitochondrion	8.06	53.98
VIT_09s0054g01250.t01	Wine grape	cytosol	20.74	52.86
VIT_10s0003g03540.t01	Wine grape	cytosol	15.46	52.47
TraesCS4A01G495100.1	Wheat	cytosol	52.31	52.31
TraesCS7A01G003500.1	Wheat	cytosol	51.78	51.65
TraesCS7D01G004000.1	Wheat	cytosol	51.78	51.65
VIT_00s0208g00080.t01	Wine grape	cytosol, endoplasmic reticulum, golgi	4.36	51.56
VIT_16s0115g00510.t01	Wine grape	cytosol, extracellular, plastid	4.62	51.47
VIT_10s0003g03550.t01	Wine grape	extracellular	6.74	51.0
EES13537	Sorghum	cytosol	51.26	50.92
VIT_10s0116g01070.t01	Wine grape	cytosol, endoplasmic reticulum, plastid	11.1	50.91
HORVU7Hr1G000400.1	Barley	cytosol, plastid	49.01	50.34
Os08t0223900-00	Rice	cytosol	51.78	49.94
Zm00001d024337_P001	Maize	cytosol	47.29	49.52
VIT_09s0054g01090.t01	Wine grape	cytosol	57.86	46.15

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:100259856	wikigene:100259856	MapMan:9.1.4.3	EMBL:AM468227	ProteinID:CAN65909
ProteinID:CAN65909.1	ProteinID:CCB45033	ProteinID:CCB45033.1	UniProt:F6GYJ7	EMBL:FN594972	GO:GO:0003674
GO:GO:0003824	GO:GO:0016853	GO:GO:0016866	EntrezGene:LOC100259856	wikigene:LOC100259856	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00015CA667
ArrayExpress:VIT_09s0054g01220	EnsemblPlantsGene:VIT_09s0054g01220	EnsemblPlants:VIT_09s0054g01220.t01	unigene:Vvi.17386	RefSeq:XP_002270934	RefSeq:XP_002270934.1
RefSeq:XP_010655248.1	SEG:seg	:	:	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:F6GYJ7]

Coordinates

chr9:-:22125467..22133940

Molecular Weight (calculated)

87153.3 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.350

Length

757 amino acids

Sequence
(BLAST)

001: MWRLKVADGG NDPYIYSTNN FVGRQIWEFD PDYGTPEERA EVEAARENFW KNRYQVKPSG DLLWRMQFLR EKNFKQTIPQ VKVGDGEEIT YETATAAVRR
101: GAHFFSALQA SDGHWPAENA GPLYFLPPLV MCLYITGHLD TVFPGEYRKE ILRYLYCHQN EDGGWGFHIE GHSTMFCTTL SYICMRILGE GPDGGRENAC
201: ARGRKWILDR GGVTSIPSWG KTWLSIFGLF DWSGSNPMPP EFWLFPSRLP MHPAKMWCYC RMVYMPMSYL YGKRFVGPIT PLVLELREEL FLQPYNEINW
301: RKVRHLCAKE DLYYPHPLIQ DLMWDGLYIC TEPLLTRWPF NKLRQKALEV TMKHIHYEDE NSRYITIGCV EKVLCMLSCW VEDPNGNYFK KHLARIPDYI
401: WVGEDGIKMQ SFGSQEWDTG FALQAVLACN MTDEIGPTLK KGHEFVKESQ VKDNPSGDFK SMYRHISKGS WTFSDQDHGW QVSDCTAEGL KCCLLFSMMP
501: PEIVGVKMEP ERLFDSVNIL LSLQSKNGGL AAWEPAGASE WLELLNPTEF FADIVIEHEY VECTASAIQA LVLFKKLYPG HRKKEIDNFI TYAAKYIEDI
601: QMPDGSWYGN WGVCFTYGSW FALGGLAAAG KTYHNCHAIR RAVEFLLNSQ RDDGGWGESY VSCPDKKYTP LEGNRSNLVH TGWALMGLIS SGQAERDPTP
701: LHRAAKLLIN FQMEDGDFPQ QEITGVFMKN CMLHYAAYRN IYPLWALAEY RRRVPLP

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.