Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
- plastid 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g01060.t01 | Wine grape | cytosol | 42.65 | 32.58 |
| VIT_09s0054g01200.t01 | Wine grape | cytosol | 36.76 | 24.75 |
| VIT_10s0003g03570.t01 | Wine grape | cytosol | 35.29 | 16.67 |
| VIT_09s0054g01250.t01 | Wine grape | cytosol | 42.65 | 9.76 |
| VIT_10s0003g03600.t01 | Wine grape | cytosol, nucleus, plasma membrane | 36.76 | 8.47 |
| VIT_09s0054g01170.t01 | Wine grape | cytosol | 4.41 | 6.67 |
| VIT_09s0054g01140.t01 | Wine grape | extracellular | 19.12 | 6.57 |
| VIT_11s0065g00050.t01 | Wine grape | cytosol, golgi, nucleus | 5.88 | 5.97 |
| VIT_09s0054g01180.t01 | Wine grape | cytosol | 55.88 | 5.91 |
| VIT_09s0054g01470.t01 | Wine grape | cytosol | 33.82 | 5.84 |
| VIT_09s0054g01360.t01 | Wine grape | cytosol, golgi, mitochondrion, plastid | 42.65 | 5.66 |
| VIT_09s0054g01120.t01 | Wine grape | cytosol | 58.82 | 5.62 |
| VIT_09s0054g01550.t01 | Wine grape | cytosol | 60.29 | 5.41 |
| VIT_11s0065g00640.t01 | Wine grape | cytosol | 58.82 | 5.26 |
| VIT_09s0054g01110.t01 | Wine grape | cytosol | 58.82 | 5.03 |
| VIT_09s0054g01500.t01 | Wine grape | cytosol | 7.35 | 5.0 |
| VIT_09s0054g01210.t01 | Wine grape | cytosol | 54.41 | 4.89 |
| VIT_09s0018g00630.t01 | Wine grape | cytosol | 54.41 | 4.88 |
| VIT_10s0003g03530.t01 | Wine grape | cytosol | 51.47 | 4.82 |
| VIT_09s0054g01220.t01 | Wine grape | cytosol | 51.47 | 4.62 |
| VIT_11s0065g00030.t01 | Wine grape | cytosol | 51.47 | 4.62 |
| VIT_10s0003g03650.t01 | Wine grape | cytosol | 51.47 | 4.61 |
| VIT_10s0003g03660.t01 | Wine grape | cytosol | 51.47 | 4.42 |
| VIT_09s0054g01230.t01 | Wine grape | cytosol | 50.0 | 4.42 |
| VIT_09s0054g01410.t01 | Wine grape | cytosol | 50.0 | 4.42 |
| Zm00001d024337_P001 | Maize | cytosol | 45.59 | 4.29 |
| VIT_10s0003g03520.t01 | Wine grape | cytosol | 47.06 | 4.25 |
| VIT_09s0054g01390.t01 | Wine grape | cytosol | 47.06 | 4.17 |
| VIT_09s0054g01090.t01 | Wine grape | cytosol | 57.35 | 4.11 |
| Os08t0223900-00 | Rice | cytosol | 47.06 | 4.08 |
| EES13537 | Sorghum | cytosol | 45.59 | 4.07 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 44.12 | 3.96 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 44.12 | 3.95 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 44.12 | 3.95 |
| VIT_09s0054g01520.t01 | Wine grape | cytosol | 48.53 | 3.8 |
| VIT_09s0054g01370.t01 | Wine grape | cytosol | 7.35 | 3.73 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 39.71 | 3.66 |
| VIT_09s0054g01280.t01 | Wine grape | cytosol | 19.12 | 3.66 |
| VIT_09s0054g01130.t01 | Wine grape | cytosol | 8.82 | 3.21 |
| VIT_04s0008g02990.t01 | Wine grape | cytosol | 4.41 | 3.19 |
| VIT_09s0054g01340.t01 | Wine grape | cytosol | 19.12 | 3.14 |
| VIT_09s0054g01420.t01 | Wine grape | cytosol, extracellular, golgi | 4.41 | 2.75 |
| VIT_10s0003g03590.t01 | Wine grape | cytosol, mitochondrion | 4.41 | 2.65 |
| VIT_04s0008g03000.t01 | Wine grape | cytosol | 10.29 | 2.28 |
| VIT_10s0003g03560.t01 | Wine grape | cytosol, peroxisome, plastid | 8.82 | 2.18 |
| VIT_09s0054g01480.t01 | Wine grape | cytosol | 13.24 | 2.14 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 2.94 | 2.0 |
| VIT_10s0116g01050.t01 | Wine grape | cytosol, nucleus, peroxisome | 7.35 | 1.91 |
| VIT_10s0003g03610.t01 | Wine grape | cytosol | 7.35 | 1.77 |
| VIT_09s0054g01330.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 1.47 | 1.47 |
| VIT_04s0008g02980.t01 | Wine grape | mitochondrion | 2.94 | 1.28 |
| VIT_09s0054g01160.t01 | Wine grape | extracellular | 1.47 | 0.99 |
| VIT_10s0003g03540.t01 | Wine grape | cytosol | 2.94 | 0.9 |
| VIT_09s0054g01290.t01 | Wine grape | cytosol | 1.47 | 0.78 |
| VIT_10s0116g01070.t01 | Wine grape | cytosol, endoplasmic reticulum, plastid | 1.47 | 0.61 |
| VIT_00s0208g00080.t01 | Wine grape | cytosol, endoplasmic reticulum, golgi | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_16s0115g00510 | EMBL:FN595518 | EnsemblPlants:VIT_16s0115g00510.t01 | EnsemblPlantsGene:VIT_16s0115g00510 | Gene3D:1.50.10.20 | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF36 | ProteinID:CCB49995 | ProteinID:CCB49995.1 | UniParc:UPI00021095DB | UniProt:F6HCQ0 | MapMan:35.1 |
Description
No Description!
Coordinates
chr16:+:4609196..4609993
Molecular Weight (calculated)
7932.7 Da
IEP (calculated)
4.810
GRAVY (calculated)
0.157
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MVCYWVEDPN SMACKCYLLR IKDYLWMADG MKMQGYHSSQ LWDVALTVQA VLATKLVDEY SLIHLNID
001: MWRLKLSEGD EESVNQHVGR QFWEYDNQFG TSEERHHINH LRSNFTLNRF SSKHSSDLLY RFQCWKEKGK GMERLPQVKV KEGEERLINE EVVNVTLRRS
101: LRFYSILQSQ DGFWPGDYGG PLFLLPALVI GLYVTEVLDG TLTAQHQIEI RRYLYNHQNK DGGWGLHVEG NSTMFCTVLS YVALRLMGEE LDGGDGAMES
201: ARSWIHHHGG ATFIPSWGKF WLSVLGAYEW SGNNPLPPEL WLLPYSLPFH PGRMWCHCRM VYLPMSYLYG RRFVCRTNGT ILSLRRELYT IPYHHIDWDT
301: ARNQCAKEDL YYPHPKIQDV LWSCLNKFGE PLLERWPLNN LRNHALQTVM QHIHYEDQNS HYICIGPVNK VLNMLCCWVE SSNSEAFKSH LSRIKDYLWV
401: AEDGMKMQGY NGSQLWDVTL AVQAILATNL VDDYGLMLKK AHNYIKNTQI RKDTSGDPGL WYRHPCKGGW GFSTGDNPWP VSDCTAEALK AALLLSQMPV
501: NLVGEPMPEE HLVDAVNFIL SLQNKNGGFA SYELTRSYPE LEVINPSETF GDIIIDYQYV ECTSAAIQGL VLFTTLNSSY KRKEIVGSIN KAVEFIEKTQ
601: LPDGSWYGSW GVCFTYATWF GIKGMLASGK TYESSLCIRK ACGFLLSKQL CCGGWGESYL SCQNKVYTNL PGNKSHIVNT SWALLALIEA GQASRDPMPL
701: HRGAKSLINS QMEDGDYPQQ EILGVFNRNC MISYSAYRNI FPIWALGEYR KLMLSL
101: LRFYSILQSQ DGFWPGDYGG PLFLLPALVI GLYVTEVLDG TLTAQHQIEI RRYLYNHQNK DGGWGLHVEG NSTMFCTVLS YVALRLMGEE LDGGDGAMES
201: ARSWIHHHGG ATFIPSWGKF WLSVLGAYEW SGNNPLPPEL WLLPYSLPFH PGRMWCHCRM VYLPMSYLYG RRFVCRTNGT ILSLRRELYT IPYHHIDWDT
301: ARNQCAKEDL YYPHPKIQDV LWSCLNKFGE PLLERWPLNN LRNHALQTVM QHIHYEDQNS HYICIGPVNK VLNMLCCWVE SSNSEAFKSH LSRIKDYLWV
401: AEDGMKMQGY NGSQLWDVTL AVQAILATNL VDDYGLMLKK AHNYIKNTQI RKDTSGDPGL WYRHPCKGGW GFSTGDNPWP VSDCTAEALK AALLLSQMPV
501: NLVGEPMPEE HLVDAVNFIL SLQNKNGGFA SYELTRSYPE LEVINPSETF GDIIIDYQYV ECTSAAIQGL VLFTTLNSSY KRKEIVGSIN KAVEFIEKTQ
601: LPDGSWYGSW GVCFTYATWF GIKGMLASGK TYESSLCIRK ACGFLLSKQL CCGGWGESYL SCQNKVYTNL PGNKSHIVNT SWALLALIEA GQASRDPMPL
701: HRGAKSLINS QMEDGDYPQQ EILGVFNRNC MISYSAYRNI FPIWALGEYR KLMLSL
Arabidopsis Description
LAS1Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.