Factsheet for Solyc12g006520.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048795	Potato	cytosol	91.4	87.04
Solyc12g006530.1.1	Tomato	cytosol	88.11	80.81
Solyc12g006510.1.1	Tomato	cytosol	84.38	78.12
KRH66676	Soybean	cytosol	64.33	71.27
KRH44692	Soybean	endoplasmic reticulum	75.93	69.55
KRH10719	Soybean	cytosol	45.42	69.52
KRH46975	Soybean	endoplasmic reticulum	75.64	69.29
KRH66671	Soybean	cytosol	74.5	68.24
Solyc12g035440.1.1	Tomato	cytosol	8.45	67.82
KRH11342	Soybean	cytosol	66.48	66.67
Solyc12g035450.1.1	Tomato	cytosol, plasma membrane, plastid	16.33	66.28
Solyc12g035460.1.1	Tomato	cytosol	20.63	64.0
Solyc07g042630.2.1	Tomato	cytosol	59.31	54.76
Solyc05g047580.2.1	Tomato	cytosol	52.29	49.93
Solyc04g050670.1.1	Tomato	cytosol	11.46	49.38
Solyc04g070980.2.1	Tomato	plastid	53.58	49.21
HORVU7Hr1G000400.1	Barley	cytosol, plastid	51.0	48.3
TraesCS4A01G495100.1	Wheat	cytosol	51.43	47.42
TraesCS7D01G004000.1	Wheat	cytosol	50.72	46.64
TraesCS7A01G003500.1	Wheat	cytosol	50.57	46.51
EES13537	Sorghum	cytosol	49.71	45.54
Os08t0223900-00	Rice	cytosol	50.14	44.59
Zm00001d024337_P001	Maize	cytosol	45.27	43.71
KRH66677	Soybean	cytosol	5.73	29.41

Protein Annotations

EnsemblPlants:Solyc12g006520.1.1	EnsemblPlantsGene:Solyc12g006520.1	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853
GO:GO:0016866	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase
PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	SUPFAM:SSF48239
TIGRFAMs:TIGR01787	UniParc:UPI000276A944	UniProt:K4DBI9	MapMan:9.1.4.3	:	:

Description

Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:K4DBI9]

Coordinates

chr12:+:1027444..1035605

Molecular Weight (calculated)

80026.1 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.221

Length

698 amino acids

Sequence
(BLAST)

001: MQFLREKNFK QRIRAVKVEE GEEISHEIAT VALRRAVHFF SALQATDGHW PAESAGPLFF LPPLVMCMYI TGHLNTVFPA EHRKEILRYI YCHQNEDGGW
101: GLHIEGHSTM FCTAMSYICM RILGEGPEGG VNNACARARK WILDHGSVIA IPSWGKTWLS ILGAFEWIGT NPMPPEFWIL PSFLPVHPAK MWCYCRTVYM
201: PMSYLYGKRF VGPITPLILK LREELYDQTY DEINWKKVRH VCAKEDLYYP HPFVQDLMWD SLYICTEPLL TRWPFNKLRN KALEVTMKHI HYEDENSRYI
301: TMGCVEKVLS MLACWVEDPN GDHFKKHLAR IPDFLWVAED GMKMQGCGSQ SWDASLAIQA LLASEMNDEI SDTLKNGHDF IKQSQVKDNP SGDFKVMYRH
401: ISKGSWAFAD QDLGWQVSDC TAEALKCCLL FSTMPPEIVG EAMDPVRLYD SVNVILSLQS KNGGLSAWEP AGAPEYLELL NPTEFFEDIV IEHEHVECTS
501: SAIQALVRFK KLYPGHRTTE VDNFINNGVK YIEDVQEPDG SWYGNWGVCF IYASWFALGG LAAVGLSYSN CAAVRKSVEF LLRTQRSDGG WGESYRSCPD
601: KVYRELETEH SNLVQTAWAL MGLIHSGQVE RDPRPLHRAA KLLINSQMED GDFPQQEITG VFLRNCMMHY ALYRNIFPLW GLAEYRRNVL VPLKHNYI

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.