Factsheet for TraesCS5D01G011800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G004900.1	Wheat	mitochondrion	99.21	99.21
TraesCS5D01G006600.1	Wheat	cytosol	91.04	90.92
TraesCS5D01G006700.1	Wheat	cytosol	86.56	86.45
TraesCS6D01G098800.1	Wheat	mitochondrion	68.91	68.37
GSMUA_Achr7P15790_001	Banana	cytosol	54.02	67.55
TraesCS2D01G387000.1	Wheat	cytosol, plastid	68.12	66.8
TraesCS6D01G099400.2	Wheat	cytosol	69.96	66.71
KRH74134	Soybean	endoplasmic reticulum	65.09	65.26
CDY50938	Canola	cytosol	64.95	64.61
Bra013167.1-P	Field mustard	cytosol	65.09	64.41
AT2G07050.1	Thale cress	cytosol	64.3	64.3
VIT_11s0065g00640.t01	Wine grape	cytosol	64.3	64.21
CDX93093	Canola	cytosol	64.95	64.19
VIT_09s0054g01550.t01	Wine grape	cytosol	63.24	63.32
VIT_09s0054g01180.t01	Wine grape	cytosol	53.49	63.14
PGSC0003DMT400073861	Potato	mitochondrion	40.84	62.88
CDX77512	Canola	cytosol	64.3	62.81
CDX85104	Canola	cytosol	63.11	62.7
VIT_09s0054g01120.t01	Wine grape	cytosol	58.23	62.08
TraesCS6D01G098600.1	Wheat	cytosol	69.3	61.96
VIT_09s0018g00630.t01	Wine grape	cytosol	61.79	61.87
Solyc04g070980.2.1	Tomato	plastid	61.4	61.32
VIT_09s0054g01250.t01	Wine grape	cytosol	23.58	60.27
VIT_09s0054g01110.t01	Wine grape	cytosol	63.11	60.18
TraesCS7D01G173600.1	Wheat	cytosol	41.9	59.22
TraesCS7D01G233100.2	Wheat	mitochondrion	57.84	58.46
TraesCS6D01G099900.1	Wheat	cytosol	15.68	57.77
Bra014952.1-P	Field mustard	cytosol	62.06	55.81
TraesCS6D01G100000.1	Wheat	mitochondrion	56.26	55.6
TraesCS4D01G000600.2	Wheat	mitochondrion	55.2	55.57
Solyc04g050670.1.1	Tomato	cytosol	11.86	55.56
TraesCS6D01G006500.1	Wheat	cytosol	48.48	55.17
TraesCS7D01G004000.1	Wheat	cytosol	54.41	54.41
TraesCS7D01G001800.3	Wheat	mitochondrion	30.83	54.04
VIT_04s0008g03000.t01	Wine grape	cytosol	21.74	53.75
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	14.89	50.22
VIT_09s0054g01090.t01	Wine grape	cytosol	62.71	50.16
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.35	48.53
PGSC0003DMT400048787	Potato	cytosol	3.43	44.83
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.09	44.23
VIT_04s0008g02990.t01	Wine grape	cytosol	5.4	43.62
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.94	43.01
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	18.97	33.49
CDY29789	Canola	cytosol	3.95	30.61

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF36	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS5D01G011800
EnsemblPlants:TraesCS5D01G011800.1	TIGR:cd02892	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:-:6377964..6391459

Molecular Weight (calculated)

86303.3 Da

IEP (calculated)

6.277

GRAVY (calculated)

-0.233

Length

759 amino acids

Sequence
(BLAST)

001: MWRLKIAEGS GNPLLRTTNG HVGRQVWEFD PAADDPDEVA AVDAARRDFT SRRHQMKNSS DLLMRMQLSK SNNLKMNLPP IKLEQHGYHT EEDDVLISLR
101: RAINRCSTLQ AHDGHWPGDY AGTLFLLPSL IVALHVTGAL TTVLTSEHQK EIRRYLYNHQ NEDGGWGLHI EGTSTMFCTV MNYVALRLLG EGLDSCGAML
201: QARSWILDHG GATLTPSWGK FFLSVLGVYD WSGNNPLPPE LWMMPYFLPI HPGRMWCNCR LVYLPMSYLY GKRFVGATTS IVLDLRKELY NVPYNEIDWD
301: KARNGCAKED LYYPHSPLQN IVWATLKKIG EPVLMHWPGS NLRKKALDIV MKHIKYEDET TQYICIAPLN KMLNMICCWV EDPKSEAFKL HIERVYDFLW
401: VAEDGMKMKS YNGSQLWDTA LTVQAIFATG LTKEFGHTIK VAHDYIKHSQ IRADCPGDQS KWYRHLSKGG WTHSTADQGW PVSDCTAEAF KVLLLLTKVP
501: ELVDEPIETS RLDDAVNILL SLMNDDGSFG AYELTRSYEW LELLNPSESF GGIMIEYPYV ECTSSVIQGL VLFREMYPKH IRLEEIDSCI QKAADYIESI
601: QWSDGSWYGC WAICFTYGTW FGVRGLVAAG RTYVNSLAIR KACEFLLSKE LLPSGGWGES YLSSQDKVYT NLEGNRAHAV NTSWAMLALI DAGQGQRDPA
701: CLHRAAKILM NFQSEDGEFP QQDIIGATNH NLMLTYAQFR NIFPIWALGE YYQRVLPVA

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.