Factsheet for TraesCS7D01G001800.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	39.49	76.0
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	32.79	73.58
TraesCS4A01G498200.2	Wheat	cytosol	84.76	48.87
HORVU7Hr1G047800.10	Barley	mitochondrion	75.98	47.34
TraesCS7D01G233100.2	Wheat	mitochondrion	80.37	46.34
TraesCS7A01G001700.1	Wheat	mitochondrion	72.29	45.36
OQU80182	Sorghum	mitochondrion	65.82	39.15
KXG28793	Sorghum	mitochondrion	69.05	39.03
Zm00001d052971_P005	Maize	mitochondrion	66.05	37.83
OQU80191	Sorghum	cytosol, mitochondrion	64.9	37.32
EES14558	Sorghum	cytosol	65.13	37.2
KXG24790	Sorghum	cytosol, mitochondrion	67.21	36.7
TraesCS6D01G100000.1	Wheat	mitochondrion	61.66	34.77
TraesCS4D01G000600.2	Wheat	mitochondrion	60.28	34.62
TraesCS6D01G006500.1	Wheat	cytosol	52.66	34.18
TraesCS5D01G011800.1	Wheat	mitochondrion	54.04	30.83
TraesCS5D01G006600.1	Wheat	cytosol	53.58	30.53
TraesCS6D01G099400.2	Wheat	cytosol	55.2	30.03
TraesCS6D01G098800.1	Wheat	mitochondrion	52.89	29.93
TraesCS5D01G006700.1	Wheat	cytosol	52.42	29.87
TraesCS7D01G173600.1	Wheat	cytosol	36.26	29.24
TraesCS2D01G387000.1	Wheat	cytosol, plastid	51.96	29.07
TraesCS6D01G098600.1	Wheat	cytosol	53.81	27.44
TraesCS7D01G004000.1	Wheat	cytosol	44.8	25.56
VIT_10s0003g03550.t01	Wine grape	extracellular	2.54	11.0
TraesCS6D01G099900.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7D01G001800.3	EnsemblPlantsGene:TraesCS7D01G001800	Gene3D:1.50.10.20	InterPro:SQ_cyclase_N	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF27	PFAM:PF13249	SUPFAM:SSF48239	MapMan:9.1.4.3	:	:

Description

No Description!

Coordinates

chr7D:+:1357527..1370717

Molecular Weight (calculated)

50317.4 Da

IEP (calculated)

7.847

GRAVY (calculated)

-0.097

Length

433 amino acids

Sequence
(BLAST)

001: MWRLKVSEGG GPWLRSVNNF LGRAVWEFDP DHGTPEERAE VDTLRRDFTR SRFHKRESQD LLMRMQVLIY CVSRLCKLVV YANLGFKLQH LPYNSQIIYC
101: MQYAKEKLLQ VQVDLPAIKL VDIAQVTEET VLTSLRRALS QHSALQAHDG HWPGDYSGIM FIMPILIFAL HVTGTLNTVL SREHRREICR YIYNHQNEDG
201: GWGTQVLGPS TMFGSCLNYV TLRLLDEVDN EALIKGRAWI LLHGSAAAIP QWGKIWLSVV GLYEWFGNNS IIPELWLVPH FLPIHPGRFW CFCQLIYMPM
301: SYLYGKKFVG PLIPTILAIR EELYSIPYGE VDWNKARDTC AKEDLRYPRS LLQDVIWTCL TKFVEPVLNC WPVNKLRDKA LKNLMKHIHY EDESTKYIGI
401: CPINKALNMI CCWIDDPNSD ALKLHIPRIY DYL

Best Arabidopsis Sequence Match ( AT1G78950.1 )
(BLAST)

001: MWRLKIGEGN GDDPYLFTTN NFAGRQTWEF DPDGGSPEER HSVVEARRIF YDNRFHVKAS SDLLWRMQFL REKKFEQRIA PVKVEDSEKV TFETATSALR
101: RGIHFFSALQ ASDGHWPAEN AGPLFFLPPL VFCLYITGHL DEVFTSEHRK EILRYIYCHQ KEDGGWGLHI EGHSTMFCTT LNYICMRILG ESPDGGHDNA
201: CGRAREWILS HGGVTYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFF PVHPAKMWSY CRMVYLPMSY LYGKRFVGPI TSLILQLRKE LYLQPYEEIN
301: WMKVRHLCAK EDTYYPRPLV QELVWDSLYI FAEPFLARWP FNKLLREKAL QLAMKHIHYE DENSRYITIG CVEKVLCMLA CWVEDPNGDY FKKHLSRISD
401: YLWMAEDGMK MQSFGSQLWD TGFAMQALLA SNLSSEISDV LRRGHEFIKN SQVGENPSGD YKSMYRHISK GAWTFSDRDH GWQVSDCTAH GLKCCLLFSM
501: LAPDIVGPKQ DPERLHDSVN ILLSLQSKNG GMTAWEPAGA PKWLELLNPT EMFSDIVIEH EYSECTSSAI QALSLFKQLY PDHRTTEITA FIKKAAEYLE
601: NMQTRDGSWY GNWGICFTYG TWFALAGLAA AGKTFNDCEA IRKGVQFLLA AQKDNGGWGE SYLSCSKKIY IAQVGEISNV VQTAWALMGL IHSGQAERDP
701: IPLHRAAKLI INSQLESGDF PQQQATGVFL KNCTLHYAAY RNIHPLWALA EYRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.