Factsheet for TraesCS5D01G006700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	79.47	94.82
TraesCS5B01G004800.1	Wheat	cytosol	87.24	89.23
TraesCS5D01G011800.1	Wheat	mitochondrion	86.45	86.56
TraesCS5D01G006600.1	Wheat	cytosol	84.34	84.34
TraesCS6D01G098800.1	Wheat	mitochondrion	68.03	67.58
TraesCS2D01G387000.1	Wheat	cytosol, plastid	66.84	65.63
GSMUA_Achr7P15790_001	Banana	cytosol	52.24	65.4
TraesCS6D01G099400.2	Wheat	cytosol	67.76	64.7
KRH74134	Soybean	endoplasmic reticulum	63.42	63.67
CDY50938	Canola	cytosol	63.68	63.43
Bra013167.1-P	Field mustard	cytosol	63.82	63.23
CDX93093	Canola	cytosol	63.82	63.15
AT2G07050.1	Thale cress	cytosol	62.76	62.85
VIT_11s0065g00640.t01	Wine grape	cytosol	62.37	62.37
PGSC0003DMT400073861	Potato	mitochondrion	40.26	62.07
CDX85104	Canola	cytosol	62.37	62.04
CDX77512	Canola	cytosol	63.29	61.9
VIT_09s0054g01550.t01	Wine grape	cytosol	61.58	61.74
VIT_09s0054g01180.t01	Wine grape	cytosol	51.97	61.43
VIT_09s0054g01250.t01	Wine grape	cytosol	23.82	60.94
TraesCS6D01G098600.1	Wheat	cytosol	67.89	60.78
VIT_09s0018g00630.t01	Wine grape	cytosol	60.39	60.55
VIT_09s0054g01120.t01	Wine grape	cytosol	56.71	60.53
Solyc04g070980.2.1	Tomato	plastid	60.53	60.53
VIT_09s0054g01110.t01	Wine grape	cytosol	61.18	58.42
TraesCS7D01G173600.1	Wheat	cytosol	41.05	58.1
TraesCS7D01G233100.2	Wheat	mitochondrion	57.11	57.79
TraesCS6D01G099900.1	Wheat	cytosol	15.53	57.28
TraesCS6D01G100000.1	Wheat	mitochondrion	56.18	55.6
TraesCS6D01G006500.1	Wheat	cytosol	48.42	55.17
Bra014952.1-P	Field mustard	cytosol	61.18	55.09
Solyc04g050670.1.1	Tomato	cytosol	11.71	54.94
TraesCS4D01G000600.2	Wheat	mitochondrion	54.47	54.91
VIT_04s0008g03000.t01	Wine grape	cytosol	21.58	53.42
TraesCS7D01G004000.1	Wheat	cytosol	53.29	53.36
TraesCS7D01G001800.3	Wheat	mitochondrion	29.87	52.42
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	14.87	50.22
VIT_09s0054g01090.t01	Wine grape	cytosol	61.18	49.0
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.34	48.53
VIT_04s0008g02990.t01	Wine grape	cytosol	5.92	47.87
PGSC0003DMT400062376	Potato	extracellular, vacuole	11.58	45.6
PGSC0003DMT400048787	Potato	cytosol	3.16	41.38
VIT_04s0008g02980.t01	Wine grape	mitochondrion	8.42	41.03
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	18.95	33.49
CDY29789	Canola	cytosol	3.95	30.61

Protein Annotations

EnsemblPlants:TraesCS5D01G006700.1	EnsemblPlantsGene:TraesCS5D01G006700	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF36	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	SEG:seg	SUPFAM:SSF48239
TIGR:cd02892	TIGRFAMs:TIGR01787	MapMan:9.1.4.3	:	:	:

Description

No Description!

Coordinates

chr5D:-:5587109..5598362

Molecular Weight (calculated)

86696.8 Da

IEP (calculated)

6.305

GRAVY (calculated)

-0.269

Length

760 amino acids

Sequence
(BLAST)

001: MWRLKIGEGD DNPLLRTTNG HVGRVVWKFD PDADDPEEVA AVEAARRDFT SRRHQMKNSS DLLMRMQLSK SNGLKTNLPD PIKLEQHGYA TQEAVLMSLK
101: RAISRYSTLQ ADDGHWPGEF AGTLFLLPSL IIALQVTGSL TTVLTSEHQK EIRRYLCNHQ NEDGGWGLHI EGTSTMFCSV MNYVALRLLG EGLDSRGPML
201: QARSWILDHG GATLTPSWGK FFLSVLGVYD WSGNNPLPPE LWIVPYFLPI HPGRMWCHSR LVYLPMSYLY GKRFVGTTTS IVLDLREELY TLPYNEIDWD
301: KARNGCAKED LYYSHSPLQD IVWATLRKIG EPIFLHWPGS NLRKRALDNV MKHIKYEDET TQYLCIGPLN KMLNMICCWV EDPNSEAFKL HVERIYDFLW
401: VAEDGMKLKS YNGSQLWDTV LTVQAIFATG LTKEFPHTIK LAHDYIKRSQ ICVNFPGDQS KWHRHISKGG WTHSTADHGW PVSDCTAEAL KAILLLIKLP
501: PKLVGEPMET SRLDDAINIL LSWMNDDGSF GAYELTRSYE WLELLNPSES FGDIMIEHSY VECTSSVIQG LVLFREMYPK HCRMEEIENC IQKAADYIES
601: IQRSDGSWYG CWAICFTYGT WFGVRGLIAA GRTYKNSQAI RKACEFLLSK ELLPLGGWGE SYLSGQDMVY TNLEGNRAHA INTSWAMLAL IDAGQDQRDP
701: ASLHRAATVL INFQSEDGEF PQQDIIGVAN RNLMLTYAQY RNIFPIWALG EYYRRMVLTT

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.