Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G000600.1 | Wheat | mitochondrion | 83.16 | 82.94 |
| HORVU0Hr1G022610.20 | Barley | cytosol | 42.84 | 70.83 |
| EER90340 | Sorghum | cytosol | 68.04 | 69.89 |
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 69.1 | 69.01 |
| TraesCS7D01G233100.2 | Wheat | mitochondrion | 67.9 | 68.18 |
| TraesCS7D01G173600.1 | Wheat | cytosol | 47.08 | 66.11 |
| Zm00001d014695_P001 | Maize | cytosol | 66.58 | 64.86 |
| OQU77014 | Sorghum | cytosol | 56.23 | 63.95 |
| TraesCS6D01G006500.1 | Wheat | cytosol | 56.23 | 63.57 |
| TraesCS6D01G100000.1 | Wheat | mitochondrion | 62.73 | 61.59 |
| TraesCS7D01G001800.3 | Wheat | mitochondrion | 34.62 | 60.28 |
| TraesCS6D01G099900.1 | Wheat | cytosol | 16.31 | 59.71 |
| TraesCS7D01G173700.1 | Wheat | cytosol, mitochondrion | 17.37 | 58.22 |
| TraesCS5D01G006600.1 | Wheat | cytosol | 55.84 | 55.39 |
| TraesCS5D01G011800.1 | Wheat | mitochondrion | 55.57 | 55.2 |
| TraesCS5D01G006700.1 | Wheat | cytosol | 54.91 | 54.47 |
| TraesCS2D01G387000.1 | Wheat | cytosol, plastid | 54.38 | 52.97 |
| TraesCS6D01G098800.1 | Wheat | mitochondrion | 52.92 | 52.16 |
| TraesCS6D01G099400.2 | Wheat | cytosol | 54.77 | 51.88 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 49.34 | 49.01 |
| TraesCS6D01G098600.1 | Wheat | cytosol | 53.98 | 47.94 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.77 | 36.0 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G000600.2 | EnsemblPlantsGene:TraesCS4D01G000600 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 |
| PANTHER:PTHR11764:SF23 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SUPFAM:SSF48239 | TIGR:cd02892 |
| TIGRFAMs:TIGR01787 | MapMan:9.1.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:536596..548547
Molecular Weight (calculated)
86061.9 Da
IEP (calculated)
7.366
GRAVY (calculated)
-0.321
Length
754 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKIAGQA SGGPWLQSAN GFLGRQVWEF DRDAGSPEER AEVERLREDF TKHRSHKRES QDLLLRLQFA KGTATTCTRT EKGAQVTEKM ITTSLRRALN
101: QYSALQAHDG HWPGDLSGIL FIMPMLIFSL YVTRSLNMVL SSEHQHEICR HIYNHQNEDG GWGTHIWGPS NMLGSCLNYA ALRLLVGETL DNDNDVLIKA
201: RAWILSHGSA TAVPQWGKIF LSILGVYDWS GNNPIIPELW LLPHFLPIHP GRFWCFCRLV YMSMAYLYGK KFVGLITPTI TALREELYNT PYSNIDWGKV
301: SNCCAEEDLH NPRSQVRNIV LVCLKKFVEP MLNWWPTNKL RGRALSKLME QIHYNNETTE YITICPVDKA LNMICCWVEN PNSDAFKKHL PRVYDYLWIA
401: EDGMKAKIYD GCQNWETPFI VQAMCSTNLI NEFGPTIKKA HDFMKKSQVL RNLPDYERFY RHRSKGSWTL STIDNGWPIS DGTAETLKTL LSLSNISANL
501: VGDPIEEERL YDAIDFLLSL MNKDGSICTY ERRRTATWVE LLNPSESFKN IVIDHPTSEC TASVIDGMVL FKELYPQYRS EEVGNCIKNA VKYVEGKQLK
601: DGSWYGSWGI CFTYGTMFAV KGLGAAGRNY YNSSSIRKAC KFLLSKQQST GGWGESYLSN YTEEYVDSGT PHTVETAWAM LGLIYGGQAE IDPVPLYRAA
701: QVLMSMQLET GEFPQQEHAG CANSAFYFNY PNYRNLFPIM ALGEFRRRLV ANKN
101: QYSALQAHDG HWPGDLSGIL FIMPMLIFSL YVTRSLNMVL SSEHQHEICR HIYNHQNEDG GWGTHIWGPS NMLGSCLNYA ALRLLVGETL DNDNDVLIKA
201: RAWILSHGSA TAVPQWGKIF LSILGVYDWS GNNPIIPELW LLPHFLPIHP GRFWCFCRLV YMSMAYLYGK KFVGLITPTI TALREELYNT PYSNIDWGKV
301: SNCCAEEDLH NPRSQVRNIV LVCLKKFVEP MLNWWPTNKL RGRALSKLME QIHYNNETTE YITICPVDKA LNMICCWVEN PNSDAFKKHL PRVYDYLWIA
401: EDGMKAKIYD GCQNWETPFI VQAMCSTNLI NEFGPTIKKA HDFMKKSQVL RNLPDYERFY RHRSKGSWTL STIDNGWPIS DGTAETLKTL LSLSNISANL
501: VGDPIEEERL YDAIDFLLSL MNKDGSICTY ERRRTATWVE LLNPSESFKN IVIDHPTSEC TASVIDGMVL FKELYPQYRS EEVGNCIKNA VKYVEGKQLK
601: DGSWYGSWGI CFTYGTMFAV KGLGAAGRNY YNSSSIRKAC KFLLSKQQST GGWGESYLSN YTEEYVDSGT PHTVETAWAM LGLIYGGQAE IDPVPLYRAA
701: QVLMSMQLET GEFPQQEHAG CANSAFYFNY PNYRNLFPIM ALGEFRRRLV ANKN
001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
Arabidopsis Description
CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.