Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 76.29 | 74.17 |
| OQU77014 | Sorghum | cytosol | 65.4 | 72.4 |
| OQU80191 | Sorghum | cytosol, mitochondrion | 70.57 | 68.79 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 59.95 | 68.43 |
| TraesCS4D01G000600.2 | Wheat | mitochondrion | 69.89 | 68.04 |
| OQU80182 | Sorghum | mitochondrion | 67.3 | 67.86 |
| TraesCS4A01G000600.1 | Wheat | mitochondrion | 69.62 | 67.59 |
| HORVU0Hr1G022610.20 | Barley | cytosol | 41.55 | 66.89 |
| EES14558 | Sorghum | cytosol | 68.94 | 66.75 |
| KXG24790 | Sorghum | cytosol, mitochondrion | 71.25 | 65.95 |
| KXG28793 | Sorghum | mitochondrion | 67.44 | 64.62 |
| KXG35171 | Sorghum | extracellular | 55.31 | 64.34 |
| EES17376 | Sorghum | mitochondrion | 65.67 | 63.59 |
| OQU91432 | Sorghum | cytosol | 67.17 | 62.09 |
| KXG23805 | Sorghum | cytosol | 63.9 | 61.96 |
| EES04501 | Sorghum | cytosol | 59.67 | 59.27 |
| KXG29303 | Sorghum | cytosol | 6.4 | 57.32 |
| EES06259 | Sorghum | cytosol | 57.9 | 56.14 |
| KXG28324 | Sorghum | cytosol | 20.84 | 55.64 |
| EES06258 | Sorghum | cytosol | 57.22 | 55.19 |
| OQU83221 | Sorghum | cytosol | 55.59 | 53.26 |
| EES08419 | Sorghum | cytosol, mitochondrion, plastid | 13.76 | 50.75 |
| EES13537 | Sorghum | cytosol | 50.27 | 48.43 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.9 | 36.0 |
Protein Annotations
| Gene3D:1.50.10.20 | MapMan:9.1.4.3 | UniProt:C5Z996 | ncoils:Coil | EnsemblPlants:EER90340 | ProteinID:EER90340 |
| ProteinID:EER90340.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 | GO:GO:0016866 | PFAM:PF13243 |
| PFAM:PF13249 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 | EnsemblPlantsGene:SORBI_3010G254000 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N |
| SUPFAM:SSF48239 | InterPro:Squalene_cyclase | TIGRFAMs:TIGR01787 | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0007F30D02 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:59281171..59290737
Molecular Weight (calculated)
84298.8 Da
IEP (calculated)
6.772
GRAVY (calculated)
-0.284
Length
734 amino acids
Sequence
(BLAST)
(BLAST)
001: NGFLGRQVWE FDADAGTPEE RAEVERLRQD FTRHRFQKKE SQDLLLRMQY AKQNHLVENI PAVKLEKGAE VTEEILLTSL KRAMNQYSAL QAHDGHWPGD
101: YSGILFIMPI FIFALHVTGS INVVLSLEHR REILRYIYNH QNEDGGWGTQ VLGPSSMFGS CLNYATLRLL GEAPNGENDA LAKGRAWILT HGSATAIPQW
201: GKIWLSIIGA YEWSGNNPII PELWMVPYFL PIHPGRFWCF CRLVYMPMAY LYGKKFVGPI TETILELREE LYSIPYDTID WNKARHSCAK DDLRYPRSEL
301: QNIIFSCLNK FVEPMLNCWP VNKLREKALD NLMEHIHYQE KTTKYICICP IDKKNPNSDA FKKHLPRIYD YLWLAEDGMK AQVYDGCQSW ETAFIVQAFC
401: STDLANEFSQ TLERAYDFIK KSQVLENHIN YESYYRHKSK GSWTLSTADN GWSVSDCTAE ALKALLLLSK ISPKLVAQPI KQERLYDAID SILSFMNKDG
501: TFSTYECKRT VSWIEILNPS ESFINIVVDY PSVECTSSVL EALTLFKELY PPYRAKEIKK CIKDCAMFIE NKQRKDGSWY GTWSICFTYG TMFAIKGLVA
601: AGSTYDTSSC IRKACKFLLS KQQITGGWGE SYLSSETEDY VDGGTPHAVN TAWAMLALIY AGQVERDPVP LCHAARELIN MQLETGEFPQ QEHVGCFNSS
701: LYYNYANYRN LFPIWALGEF RRRLLANKSL SQCI
101: YSGILFIMPI FIFALHVTGS INVVLSLEHR REILRYIYNH QNEDGGWGTQ VLGPSSMFGS CLNYATLRLL GEAPNGENDA LAKGRAWILT HGSATAIPQW
201: GKIWLSIIGA YEWSGNNPII PELWMVPYFL PIHPGRFWCF CRLVYMPMAY LYGKKFVGPI TETILELREE LYSIPYDTID WNKARHSCAK DDLRYPRSEL
301: QNIIFSCLNK FVEPMLNCWP VNKLREKALD NLMEHIHYQE KTTKYICICP IDKKNPNSDA FKKHLPRIYD YLWLAEDGMK AQVYDGCQSW ETAFIVQAFC
401: STDLANEFSQ TLERAYDFIK KSQVLENHIN YESYYRHKSK GSWTLSTADN GWSVSDCTAE ALKALLLLSK ISPKLVAQPI KQERLYDAID SILSFMNKDG
501: TFSTYECKRT VSWIEILNPS ESFINIVVDY PSVECTSSVL EALTLFKELY PPYRAKEIKK CIKDCAMFIE NKQRKDGSWY GTWSICFTYG TMFAIKGLVA
601: AGSTYDTSSC IRKACKFLLS KQQITGGWGE SYLSSETEDY VDGGTPHAVN TAWAMLALIY AGQVERDPVP LCHAARELIN MQLETGEFPQ QEHVGCFNSS
701: LYYNYANYRN LFPIWALGEF RRRLLANKSL SQCI
001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS
Arabidopsis Description
CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.