CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80191	Sorghum	cytosol, mitochondrion	87.23	84.33
KXG24790	Sorghum	cytosol, mitochondrion	87.91	80.71
TraesCS7A01G232900.1	Wheat	mitochondrion	77.61	75.23
TraesCS7D01G233100.2	Wheat	mitochondrion	77.47	75.1
TraesCS7B01G131400.1	Wheat	mitochondrion	77.47	75.1
HORVU7Hr1G047800.10	Barley	mitochondrion	69.23	72.52
TraesCS7D01G173600.1	Wheat	cytosol	53.3	72.25
TraesCS7A01G001700.1	Wheat	mitochondrion	68.27	72.03
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	19.09	72.02
TraesCS4A01G498200.2	Wheat	cytosol	73.21	70.97
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	21.57	69.78
TraesCS4A01G496400.1	Wheat	mitochondrion	71.57	68.92
TraesCS4A01G499100.1	Wheat	cytosol	37.23	67.92
KXG28793	Sorghum	mitochondrion	71.43	67.89
EES14558	Sorghum	cytosol	70.19	67.41
EER90340	Sorghum	cytosol	67.86	67.3
TraesCS7D01G001800.3	Wheat	mitochondrion	39.15	65.82
KXG29446	Sorghum	endoplasmic reticulum, extracellular	55.77	63.14
TraesCSU01G191900.1	Wheat	extracellular, vacuole	13.32	62.18
HORVU0Hr1G025390.3	Barley	endoplasmic reticulum	65.8	61.73
OQU77014	Sorghum	cytosol	56.04	61.54
EES04501	Sorghum	cytosol	61.13	60.22
OQU91432	Sorghum	cytosol	62.91	57.68
KXG35171	Sorghum	extracellular	49.31	56.89
EES17376	Sorghum	mitochondrion	59.07	56.73
KXG23805	Sorghum	cytosol	58.24	56.01
EES06259	Sorghum	cytosol	55.49	53.37
EES06258	Sorghum	cytosol	54.67	52.3
OQU83221	Sorghum	cytosol	54.81	52.09
EES08419	Sorghum	cytosol, mitochondrion, plastid	14.15	51.76
EES13537	Sorghum	cytosol	49.86	47.64
KXG28324	Sorghum	cytosol	17.31	45.82
VIT_10s0003g03550.t01	Wine grape	extracellular	5.22	38.0
HORVU7Hr1G047790.3	Barley	cytosol, extracellular	3.98	37.18
KXG29303	Sorghum	cytosol	3.43	30.49

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	UniProt:A0A1Z5R8U5	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853
GO:GO:0016866	EnsemblPlants:OQU80182	ProteinID:OQU80182	ProteinID:OQU80182.1	PFAM:PF13243	PFAM:PF13249
ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	EnsemblPlantsGene:SORBI_3007G090469	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N
SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000B8BB2B3
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:14031444..14077281

Molecular Weight (calculated)

83171.2 Da

IEP (calculated)

5.872

GRAVY (calculated)

-0.255

Length

728 amino acids

Sequence
(BLAST)

001: MWRLKVAEGA GPWLKSSNNF RGRAVWEFDP ELGTPEERAE VERVRREFTE RRFEKRESSD LLLQMQYAKH KHLQVDPPPA TLAENEEVTE EIILAALKRA
101: LAQHSSLQAD DGCWPADFSG ILFIMPLLVF ALYTTGSLNT VLSKEHRREI CRYIYNHQNE DGGWGKQVLG PSTMFGSCLN YVALRLIGEE RKNVALTKGR
201: EWILSHGSAT AIPQWGKIWF SVMGLYDWSG NNPIIPELWL VPHFLPIHPG RFWVYCRMVY LPMAYLFAKK FVGTITPTIL ELRDELYSIP YSEIDWKEAR
301: DTCAKVDLVY PRTMAQNLVW TCLNKVIEPV LNCWPFNKLR DIALKNIMEH IHYEDETSKY ICVCPINKAL DMICCWAENP DSDAFKQHLP RIYDFLWLAE
401: DGMKAQVYDG CATWEISFIV QAYCSSGLVN EIGSTLRKAH EFIKSSQIHE NHPNYKAYYR HASKGSWTLS TTDNGWSVSD CTAEALKALL LLSKISPDLV
501: GEPIKGERLY DAVDCILSYV NDDGTFSTYE CKRTTPLLEV LNPSECFQNI VVDYPSVECT SSALQALIMF RELDHKYRKE EIENCIESAF KFIEKEQQKD
601: GSWFGNWGIC FTYGSFFAIK GLAACGRTYD NSAAIRKACS FLLSKQLSTG GWGESYLSSE TENYMEASTP HAVNTAWAML ALIYGGQVDR NPTPLYKAAK
701: ELINMQLVSG DFPQQVSFFS YRKNGLDY

Best Arabidopsis Sequence Match ( AT1G78950.2 )
(BLAST)

001: MRYVAHIFVM WRLKIGEGNG DDPYLFTTNN FAGRQTWEFD PDGGSPEERH SVVEARRIFY DNRFHVKASS DLLWRMQFLR EKKFEQRIAP VKVEDSEKVT
101: FETATSALRR GIHFFSALQA SDGHWPAENA GPLFFLPPLV FCLYITGHLD EVFTSEHRKE ILRYIYCHQK EDGGWGLHIE GHSTMFCTTL NYICMRILGE
201: SPDGGHDNAC GRAREWILSH GGVTYIPSWG KTWLSILGVF DWSGSNPMPP EFWILPSFFP VHPAKMWSYC RMVYLPMSYL YGKRFVGPIT SLILQLRKEL
301: YLQPYEEINW MKVRHLCAKE DTYYPRPLVQ ELVWDSLYIF AEPFLARWPF NKLLREKALQ LAMKHIHYED ENSRYITIGC VEKVLCMLAC WVEDPNGDYF
401: KKHLSRISDY LWMAEDGMKM QSFGSQLWDT GFAMQALLAS NLSSEISDVL RRGHEFIKNS QVGENPSGDY KSMYRHISKG AWTFSDRDHG WQVSDCTAHG
501: LKCCLLFSML APDIVGPKQD PERLHDSVNI LLSLQSKNGG MTAWEPAGAP KWLELLNPTE MFSDIVIEHE YSECTSSAIQ ALSLFKQLYP DHRTTEITAF
601: IKKAAEYLEN MQTRDGSWYG NWGICFTYGT WFALAGLAAA GKTFNDCEAI RKGVQFLLAA QKDNGGWGES YLSCSKKIYI AQVGEISNVV QTAWALMGLI
701: HSGQAERDPI PLHRAAKLII NSQLESGDFP QQQATGVFLK NCTLHYAAYR NIHPLWALAE YRARVSLP

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G78950]
SUBAcon: [cytosol,plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.