CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G191900.1	Wheat	extracellular, vacuole	16.49	80.13
TraesCS7D01G233100.2	Wheat	mitochondrion	74.14	74.83
TraesCS7B01G131400.1	Wheat	mitochondrion	74.14	74.83
TraesCS7A01G232900.1	Wheat	mitochondrion	73.88	74.57
TraesCS4A01G499100.1	Wheat	cytosol	39.18	74.44
TraesCS7A01G001700.1	Wheat	mitochondrion	67.68	74.35
TraesCS7D01G173600.1	Wheat	cytosol	52.37	73.93
TraesCS4A01G498200.2	Wheat	cytosol	72.16	72.84
TraesCS4A01G496400.1	Wheat	mitochondrion	70.84	71.03
OQU80191	Sorghum	cytosol, mitochondrion	70.18	70.65
HORVU7Hr1G047800.10	Barley	mitochondrion	64.38	70.22
OQU80182	Sorghum	mitochondrion	67.41	70.19
EER90340	Sorghum	cytosol	66.75	68.94
KXG28793	Sorghum	mitochondrion	68.87	68.15
KXG24790	Sorghum	cytosol, mitochondrion	71.24	68.1
HORVU7Hr1G047790.3	Barley	cytosol, extracellular	6.99	67.95
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	19.79	66.67
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	16.89	66.32
TraesCS7D01G001800.3	Wheat	mitochondrion	37.2	65.13
KXG29446	Sorghum	endoplasmic reticulum, extracellular	53.83	63.45
OQU77014	Sorghum	cytosol	55.15	63.05
HORVU0Hr1G025390.3	Barley	endoplasmic reticulum	63.85	62.37
KXG35171	Sorghum	extracellular	51.32	61.65
EES17376	Sorghum	mitochondrion	60.29	60.29
KXG23805	Sorghum	cytosol	59.37	59.45
OQU91432	Sorghum	cytosol	61.74	58.94
EES04501	Sorghum	cytosol	55.54	56.97
EES06259	Sorghum	cytosol	55.41	55.48
EES06258	Sorghum	cytosol	55.15	54.93
OQU83221	Sorghum	cytosol	54.35	53.79
KXG28324	Sorghum	cytosol	19.0	52.36
EES08419	Sorghum	cytosol, mitochondrion, plastid	13.72	52.26
KXG29303	Sorghum	cytosol	5.54	51.22
EES13537	Sorghum	cytosol	48.02	47.77
VIT_10s0003g03550.t01	Wine grape	extracellular	4.62	35.0

Protein Annotations

Gene3D:1.50.10.20	MapMan:9.1.4.3	UniProt:C5YGW6	EnsemblPlants:EES14558	ProteinID:EES14558	ProteinID:EES14558.2
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853
GO:GO:0016866	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF23
EnsemblPlantsGene:SORBI_3007G043100	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	unigene:Sbi.20638	InterPro:Squalene_cyclase
TIGRFAMs:TIGR01787	TMHMM:TMhelix	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00081AC275	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:4292681..4310814

Molecular Weight (calculated)

86796.7 Da

IEP (calculated)

6.544

GRAVY (calculated)

-0.278

Length

758 amino acids

Sequence
(BLAST)

001: MWKLKVSEEA SDDPWLSSAY NFLGRAVWEF DPDLGTTEEC AEVERVRKEF TDHRFQKRES QDLLMRMQYA KQKKVEIDVP AIKLAKTDDE VTKEIIETSL
101: HRALTQHASL QAPDGHWPAE YSGVLFVMPI MVFALHVTGS LDSVLSTEHR HEICRYLYNH QNEDGGWGTQ ILGPSTMFGS CLNYVTLRLL GQACENDALT
201: KGRAWILSHG GASAIPQWGK IWLSVIGLYD WSGNNAMIPE LWIIPYFLPM HPGRFWCFCR LVYMPMAYLY GKKFVGTLTP TILALRKELY SEPYCNVDWI
301: KARRTCAKED LRFPQPWVQT IAWTCINKIV EPMFNYWPFT KIRDTALDEL MKHIHYEDET TKYIGACPVN KALNMICCWI ENPDSDAFKK HVPRIYDYLW
401: LAEDGMKAKA YDGVQCWEAA LIVRAYCSTE LAKEFGPTLS KVHNFLKNSQ IREDHPDYRT YYRHRSKGSW TVSTSDNGWS VSDCTAEALQ ALLLLSKLPP
501: ELVGEPIQGQ RLYDAVDCLL SFMNNDGTFS TYECKRTSSL LELLNPCETF ANIMVDNPCV ECTSSVLQAL VTFRDLYPGY RKDEIENCVK NATKFIENKQ
601: QPDGSWFGTW GICFIYGTLF AVKGLVAAGK TYKNSYSIRK ACNFLLSKQL SSGGWGETYL SSETGIYAEA SSPHAVSTAW AMLALLYAGQ VERDPTPLYH
701: AAKELINMQL DSGDFPQQEH VGVSNRYMYF NYGNYRNLFP IWALGELRRQ YVLRKICN

Best Arabidopsis Sequence Match ( AT1G78955.1 )
(BLAST)

001: MWKLKIANGN KEEPYLFSTN NFLGRQTWEF DPDAGTVEEL AAVEEARRKF YDDRFRVKAS SDLIWRMQFL KEKKFEQVIP PAKVEDANNI TSEIATNALR
101: KGVNFLSALQ ASDGHWPAEN AGPLFFLPPL VFCLYVTGHL HEIFTQDHRR EVLRYIYCHQ NEDGGWGLHI EGNSTMFCTT LNYICMRILG EGPNGGPGNA
201: CKRARDWILD HGGATYIPSW GKTWLSILGV FDWSGSNPMP PEFWILPSFL PIHPAKMWCY CRLVYMPMSY LYGKRFVGPI SPLILQLREE IYLQPYAKIN
301: WNRARHLCAK EDAYCPHPQI QDVIWNCLYI FTEPFLACWP FNKLLREKAL GVAMKHIHYE DENSRYITIG CVEKALCMLA CWVEDPNGIH FKKHLLRISD
401: YLWIAEDGMK MQSFGSQLWD SGFALQALVA SNLVNEIPDV LRRGYDFLKN SQVRENPSGD FTNMYRHISK GSWTFSDRDH GWQASDCTAE SFKCCLLLSM
501: IPPDIVGPKM DPEQLYEAVT ILLSLQSKNG GVTAWEPARG QEWLELLNPT EVFADIVVEH EYNECTSSAI QALILFKQLY PNHRTEEINT SIKKAVQYIE
601: SIQMLDGSWY GSWGVCFTYS TWFGLGGLAA AGKTYNNCLA MRKGVHFLLT TQKDNGGWGE SYLSCPKKRY IPSEGERSNL VQTSWAMMGL LHAGQAERDP
701: SPLHRAAKLL INSQLENGDF PQQEITGAFM KNCLLHYAAY RNIFPVWALA EYRRRVPLPY EKPSTERRS

Arabidopsis Description

CAMS1Camelliol C synthase [Source:UniProtKB/Swiss-Prot;Acc:P0C8Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.