CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80191	Sorghum	cytosol, mitochondrion	84.62	89.11
OQU80182	Sorghum	mitochondrion	80.71	87.91
TraesCSU01G191900.1	Wheat	extracellular, vacuole	15.64	79.49
TraesCS7D01G233100.2	Wheat	mitochondrion	74.65	78.83
TraesCS7B01G131400.1	Wheat	mitochondrion	74.53	78.7
TraesCS7A01G232900.1	Wheat	mitochondrion	74.4	78.56
TraesCS7A01G001700.1	Wheat	mitochondrion	66.96	76.96
TraesCS7D01G173600.1	Wheat	cytosol	51.95	76.72
TraesCS4A01G498200.2	Wheat	cytosol	71.25	75.23
TraesCS4A01G499100.1	Wheat	cytosol	37.58	74.69
HORVU7Hr1G047790.3	Barley	cytosol, extracellular	7.31	74.36
Os06t0483200-02	Rice	cytosol, mitochondrion, peroxisome, plastid	18.03	74.09
TraesCS4A01G496400.1	Wheat	mitochondrion	69.99	73.41
HORVU7Hr1G047800.10	Barley	mitochondrion	63.93	72.95
EER90340	Sorghum	cytosol	65.95	71.25
EES14558	Sorghum	cytosol	68.1	71.24
TraesCS7D01G173700.1	Wheat	cytosol, mitochondrion	20.05	70.67
KXG28793	Sorghum	mitochondrion	65.57	67.89
TraesCS7D01G001800.3	Wheat	mitochondrion	36.7	67.21
KXG29446	Sorghum	endoplasmic reticulum, extracellular	53.59	66.1
HORVU0Hr1G025390.3	Barley	endoplasmic reticulum	64.06	65.46
OQU77014	Sorghum	cytosol	54.1	64.71
OQU91432	Sorghum	cytosol	62.3	62.22
EES17376	Sorghum	mitochondrion	58.89	61.61
KXG35171	Sorghum	extracellular	48.42	60.86
EES04501	Sorghum	cytosol	56.12	60.22
KXG23805	Sorghum	cytosol	57.25	59.97
EES06259	Sorghum	cytosol	53.47	56.01
EES06258	Sorghum	cytosol	52.71	54.93
KXG29303	Sorghum	cytosol	5.67	54.88
OQU83221	Sorghum	cytosol	52.96	54.83
KXG28324	Sorghum	cytosol	18.79	54.18
EES08419	Sorghum	cytosol, mitochondrion, plastid	13.49	53.77
EES13537	Sorghum	cytosol	47.92	49.87
VIT_10s0003g03550.t01	Wine grape	extracellular	4.67	37.0

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:8073228	MapMan:9.1.4.3	UniProt:A0A1B6PGI7	GO:GO:0003674	GO:GO:0003824
GO:GO:0016853	GO:GO:0016866	EnsemblPlants:KXG24790	ProteinID:KXG24790	ProteinID:KXG24790.1	PFAM:PF13243
PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	EnsemblPlantsGene:SORBI_3007G085800	InterPro:SQ_cyclase_C
InterPro:SQ_cyclase_N	SUPFAM:SSF48239	unigene:Sbi.3253	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00081ADAB9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:10938605..10971501

Molecular Weight (calculated)

90604.2 Da

IEP (calculated)

6.867

GRAVY (calculated)

-0.333

Length

793 amino acids

Sequence
(BLAST)

001: MWRLKVAEGG GPWLKSCNNF RGRAVWEFDP ELGTPEERAE VERVRREFTE RRFQKRESSD LLLRMQEQKL NERALKWEEK GDGVFILEQS TDIVGRKVSS
101: RDGTGLYAKH KHLQVDPPPT KLAENVEVTE EIILAALRRA LDQHSSLQAE DGCWPADYSG ILFIMPLLVF ALYTTGSLDT VLSKEHRREI CRYIYNHQNE
201: DGGWGKQVLG PSTMFGSCLN YVALRLIGEK PTNAALTKGR QWILSHGSAA AIPQWGKIWF SVMGLYDWSG NNPIVPELWL VPHFLPIHPG RFWVFCRMVY
301: LPMAYLFGRK FIGTITPTIL ELRDELYSVP YSEVDWEKAR DTCAKVDLIY PRTMAQNLVW TCLNKVIEPM LNCWPVNKLR DIALKNIMKH IHYEDETSKY
401: ICTCPINKAL DMICCWAENP NSDSFKKHLP RIYDMLWIAE DGMKAQVYDG NPTWETSFIV QAYCSTGLVN EIGSTLRKAH EFIKSSQICE NHPDYKTYYR
501: HKSKGSWTLS TADNGWSVSD CTAEAVKALM LLSKISPDLV GEPIEGQSLY NAVDCLLSYV NNDGTFSTYE CKRTTPLLEV LNPSESFINI VVDYPSVECT
601: SSVLQALIMF RDLDHGYRKE EIGNCIESAT KFIEKEQRKD GSWFGSWGVC FTYGSFFAIK GLAASGRTYK NSDTIRKACN FLLSKQLHTG GWGESYLSSE
701: TEEYVDASRP HAVNTAWAML ALVYGGQVER DPTPLYKAAK VLINMQLESG DFPQQEHVGC FNSSLYFNYG NYRNLYPIWA LGEFRQRLLA RKK

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.