CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06259	Sorghum	cytosol	91.2	91.68
Zm00001d015234_P002	Maize	cytosol	87.65	87.53
Zm00001d053889_P004	Maize	cytosol	87.25	87.37
TraesCS6A01G110800.1	Wheat	cytosol, golgi	84.76	84.87
TraesCS6B01G139000.1	Wheat	golgi	84.36	84.47
Os02t0139700-01	Rice	cytosol	83.84	84.06
KXG29303	Sorghum	cytosol	8.94	82.93
TraesCS6D01G099400.2	Wheat	cytosol	84.1	80.4
HORVU6Hr1G019840.10	Barley	mitochondrion	82.65	79.52
GSMUA_Achr7P15790_001	Banana	cytosol	61.89	77.59
KXG28324	Sorghum	cytosol	27.07	74.91
KRH74134	Soybean	endoplasmic reticulum	73.19	73.58
PGSC0003DMT400073861	Potato	mitochondrion	47.04	72.62
AT2G07050.1	Thale cress	cytosol	72.27	72.46
VIT_11s0065g00640.t01	Wine grape	cytosol	71.48	71.58
CDY50938	Canola	cytosol	71.48	71.3
Bra013167.1-P	Field mustard	cytosol	71.48	70.93
VIT_09s0018g00630.t01	Wine grape	cytosol	70.43	70.71
CDX93093	Canola	cytosol	71.35	70.7
VIT_09s0054g01550.t01	Wine grape	cytosol	69.78	70.05
VIT_09s0054g01180.t01	Wine grape	cytosol	59.0	69.83
VIT_09s0054g01120.t01	Wine grape	cytosol	65.31	69.8
CDX85104	Canola	cytosol	69.65	69.37
CDX77512	Canola	cytosol	70.83	69.37
OQU83221	Sorghum	cytosol	69.12	68.67
Solyc04g070980.2.1	Tomato	plastid	68.46	68.55
VIT_09s0054g01110.t01	Wine grape	cytosol	71.35	68.22
VIT_09s0054g01250.t01	Wine grape	cytosol	26.02	66.67
Solyc04g050670.1.1	Tomato	cytosol	13.67	64.2
EES08419	Sorghum	cytosol, mitochondrion, plastid	16.56	63.32
Bra014952.1-P	Field mustard	cytosol	68.2	61.49
KXG29446	Sorghum	endoplasmic reticulum, extracellular	50.07	59.25
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	5.26	58.82
VIT_09s0054g01090.t01	Wine grape	cytosol	72.01	57.74
EER90340	Sorghum	cytosol	55.19	57.22
OQU80191	Sorghum	cytosol, mitochondrion	55.72	56.31
EES14558	Sorghum	cytosol	54.93	55.15
KXG28793	Sorghum	mitochondrion	55.06	54.7
OQU80182	Sorghum	mitochondrion	52.3	54.67
OQU77014	Sorghum	cytosol	47.44	54.45
EES13537	Sorghum	cytosol	54.4	54.33
KXG35171	Sorghum	extracellular	44.55	53.72
KXG24790	Sorghum	cytosol, mitochondrion	54.93	52.71
EES04501	Sorghum	cytosol	51.12	52.64
VIT_04s0008g03000.t01	Wine grape	cytosol	21.02	52.12
EES17376	Sorghum	mitochondrion	50.72	50.92
KXG23805	Sorghum	cytosol	50.46	50.73
OQU91432	Sorghum	cytosol	52.56	50.38
PGSC0003DMT400048787	Potato	cytosol	3.68	48.28
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.59	46.79
VIT_04s0008g02990.t01	Wine grape	cytosol	5.52	44.68
PGSC0003DMT400062376	Potato	extracellular, vacuole	11.04	43.52
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	20.11	35.58
CDY29789	Canola	cytosol	3.81	29.59

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:8062823	MapMan:9.1.4.3	MapMan:9.1.5.3	UniProt:C5XUJ5	EnsemblPlants:EES06258
ProteinID:EES06258	ProteinID:EES06258.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0016853	GO:GO:0016866
PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	PANTHER:PTHR11764	PANTHER:PTHR11764:SF27	EnsemblPlantsGene:SORBI_3004G037100
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase	TIGRFAMs:TIGR01787	InterPro:Terpene_synthase_CS
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0001A85979	RefSeq:XP_002453282.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:2970638..2979778

Molecular Weight (calculated)

86004.7 Da

IEP (calculated)

6.007

GRAVY (calculated)

-0.239

Length

761 amino acids

Sequence
(BLAST)

001: MWRLRVAEDG GGGGGGLRTK NGHVGRQVWE FDAAADPDPA VDAARQAFVD TRHHLKHSAD LLMRIQLAKE NPLQLDLLAM KLDEHEDVTV EAVSTTLKRA
101: LNRFSTIQAH DGHWPGDYGG PMFLMPGLVI TLYVTGALNI VLSPEHQKEI RRYLYNHQNE DGGWGMHIEG PSTMFGSALS YVILRLLGEG PDSGDGAMEN
201: GRNWILDHGG ATYIASWGKF WLSILGVFEW SGNNPVPPEL WLLPYLLPFH PGRMWCHCRM LYLPMCYIYG KRFVGRITPL VLELRKEIFN DPYNEIDWDK
301: VRNICAKEDL YRPHPFVQDV LWASLHKFVE PVMMHWPGCK LREKALEIVM QHVHYEDENT QYICIGPVTK VLNMLACWIE DPNSEAFKLH IPRVYDYLWL
401: AEDGMKMQGY NGSQLWDTAF AVQAIVATNL IKEFGPTLKL AHSYIKNSQV LDDCPGDLND WYRHTSKGAW PFSTADNGWT VSDCTAEGLK ASLLLSKISP
501: EIVGEPVEAN RFYDAVSCLM SYMNDNGGFA TYELTRSYAW LELINPTETF GDIMIDYPYV ECTSAAIQAL TSFRKLYPGH RRKEVDNCIS KAANFIEDVQ
601: RSDGSWYGSW AVCFTYGTWF GVKGLIAAGR TFENSPAIRK ACGFLLSKEL LPSGGWGESY LSSQDQVYTN LKGNRAHAVN TSWAMLALID AGQAERDPTP
701: LHRAAKVLIN LQSEDGEFPQ QEIVGVFNKN CMISYSQYRN IFPIWALGAY RCRVLLEDGK Q

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.