Factsheet for TraesCS6A01G110200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G098800.1	Wheat	mitochondrion	95.09	93.73
TraesCS6A01G110300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	90.32	89.96
Os02t0139500-02	Rice	cytosol	38.46	81.92
TraesCS6A01G110800.1	Wheat	cytosol, golgi	76.53	75.92
GSMUA_Achr7P15790_001	Banana	cytosol	59.02	73.31
KRH74134	Soybean	endoplasmic reticulum	69.36	69.09
VIT_11s0065g00640.t01	Wine grape	cytosol	69.5	68.95
AT2G07050.1	Thale cress	cytosol	68.7	68.25
CDY50938	Canola	cytosol	68.17	67.37
TraesCS5A01G004900.1	Wheat	mitochondrion	67.77	67.33
Bra013167.1-P	Field mustard	cytosol	68.44	67.28
CDX93093	Canola	cytosol	68.3	67.06
PGSC0003DMT400073861	Potato	mitochondrion	43.77	66.94
VIT_09s0054g01250.t01	Wine grape	cytosol	26.26	66.67
CDX85104	Canola	cytosol	67.24	66.36
CDX77512	Canola	cytosol	68.3	66.28
TraesCS5A01G005900.1	Wheat	cytosol, golgi, mitochondrion, plastid	55.97	66.25
VIT_09s0018g00630.t01	Wine grape	cytosol	65.65	65.3
VIT_09s0054g01550.t01	Wine grape	cytosol	65.38	65.04
VIT_09s0054g01180.t01	Wine grape	cytosol	55.04	64.54
Solyc04g070980.2.1	Tomato	plastid	64.46	63.95
VIT_09s0054g01120.t01	Wine grape	cytosol	59.95	63.48
VIT_09s0054g01110.t01	Wine grape	cytosol	65.92	62.44
Solyc04g050670.1.1	Tomato	cytosol	12.86	59.88
Bra014952.1-P	Field mustard	cytosol	65.65	58.65
TraesCS7A01G232900.1	Wheat	mitochondrion	57.82	58.06
TraesCS7A01G001700.1	Wheat	mitochondrion	52.79	57.68
TraesCS4A01G498200.2	Wheat	cytosol	56.63	56.86
TraesCS4A01G499100.1	Wheat	cytosol	29.44	55.64
TraesCS4A01G496400.1	Wheat	mitochondrion	55.3	55.16
TraesCS4A01G000600.1	Wheat	mitochondrion	54.11	53.97
TraesCS6A01G111400.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	55.3	53.95
TraesCS4A01G495100.1	Wheat	cytosol	53.32	53.1
VIT_09s0054g01330.t01	Wine grape	cytosol, mitochondrion, peroxisome	4.77	52.94
VIT_09s0054g01090.t01	Wine grape	cytosol	66.31	52.69
TraesCS7A01G003500.1	Wheat	cytosol	52.65	52.31
VIT_04s0008g03000.t01	Wine grape	cytosol	20.82	51.14
TraesCS4A01G498900.1	Wheat	cytosol	5.97	48.91
VIT_04s0008g02990.t01	Wine grape	cytosol	5.84	46.81
VIT_04s0008g02980.t01	Wine grape	mitochondrion	9.15	44.23
PGSC0003DMT400048787	Potato	cytosol	3.32	43.1
PGSC0003DMT400062376	Potato	extracellular, vacuole	10.34	40.41
PGSC0003DMT400077891	Potato	extracellular, golgi, mitochondrion, plastid	20.95	36.74
CDY29789	Canola	cytosol	4.38	33.67

Protein Annotations

EnsemblPlants:TraesCS6A01G110200.1	EnsemblPlantsGene:TraesCS6A01G110200	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824	GO:GO:0016866
InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Squalene_cyclase	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF27	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074	SEG:seg	SUPFAM:SSF48239
TIGR:cd02892	TIGRFAMs:TIGR01787	MapMan:9.1.4.3	MapMan:9.1.5.3	:	:

Description

No Description!

Coordinates

chr6A:-:79272230..79293391

Molecular Weight (calculated)

85746.3 Da

IEP (calculated)

6.637

GRAVY (calculated)

-0.276

Length

754 amino acids

Sequence
(BLAST)

001: MWRLRIGEEA GGQPWLRTTN AHAGRQVWEF DPAAAGGGAL DDVDDARREY SSRRHQLKHS ADRLMRLQFA ELTAPKLDIP GSKLEEHEDV TEEAVLTSLK
101: RAIRQLSTLQ AHDGHWPGDI AGPMFLLPGL VIALHSTGAL NTVLSSEHQK EIRRYLYNHQ NKDGGWGLHI EGPSTMFGSV LNYVTLRLLG EGSDSEDGAI
201: QLAQNWILDH GGATFTTSWG KFWLLVLGVF DWSGNNPLLP GLWLLPYCLP FHPGRMWSHC RMVYFPMSYI YGKRFVGPIT PTVLNLRKEL YKVPYDEIDW
301: DKARSQCAKE DLYCPHPLGQ DILWSTLHKF VEPVLSHWPG SKLREKALKN AMQHIHYEDE NTQYICSGDV GKVLNMLCCW IEDPNSQEFK LHIPRIYDYL
401: WVAEDGMKMQ GYNGSQLWDT AFTVEAILAT ELTEEFCPTL KLAHGYIKNS QVLHDCHGDL SVWYRHISKG AWTFSTADHV WPVSDCTALG LKASLLLSKI
501: SPKMVGVSIE ANRLYDAVNC LLSWMNGNGG FASYELTRSY AWLEFLNPSE IFGDIMIDHP VVECTSEVIQ ALTAFRKHYP GHRREEIDKC IHKAENFIES
601: IQRSDGSWYG SWAICFTYGT WYAVRGLVAA GRTFKNCHAI RKACDFLLSK ETPSGGWGES YLSCRDKVYT ELEGRRPHVV NTSWAMLAER DPGPLHRAAR
701: VLINLQLEDG EFLQQEIIGI FARNCTISYS QYRNIFPIWA LGEYRCRVLT MPSC

Best Arabidopsis Sequence Match ( AT2G07050.1 )
(BLAST)

001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE

Arabidopsis Description

CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.