Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G390900.1 | Wheat | extracellular, plasma membrane | 83.53 | 96.47 |
| Os11t0285000-01 | Rice | plasma membrane | 77.29 | 76.58 |
| TraesCS7B01G131400.1 | Wheat | mitochondrion | 70.78 | 70.97 |
| TraesCS2B01G049300.2 | Wheat | mitochondrion | 68.92 | 68.74 |
| TraesCS6B01G139500.1 | Wheat | mitochondrion | 63.21 | 61.98 |
| TraesCS2B01G407300.1 | Wheat | cytosol | 32.14 | 54.88 |
| TraesCS6B01G139000.1 | Wheat | golgi | 54.32 | 53.82 |
| TraesCS2B01G407200.1 | Wheat | cytosol | 5.31 | 53.33 |
| TraesCS6B01G138500.1 | Wheat | cytosol | 49.14 | 51.39 |
| TraesCS5B01G004800.1 | Wheat | cytosol | 49.54 | 50.2 |
| TraesCS5B01G545900.1 | Wheat | cytosol | 48.47 | 49.93 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 4.52 | 34.0 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G390800.1 | EnsemblPlantsGene:TraesCS4B01G390800 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 |
| PFAM:PF13243 | PFAM:PF13249 | SUPFAM:SSF48239 | TIGR:cd02892 | TIGRFAMs:TIGR01787 | MapMan:9.1.4.3 |
Description
No Description!
Coordinates
chr4B:+:666668559..666685593
Molecular Weight (calculated)
86105.3 Da
IEP (calculated)
6.585
GRAVY (calculated)
-0.306
Length
753 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKISEGG SPLLRSGNGF LGRAVWEYDP NAGTPEERAE VERLRCDFTR NRFQRKESQD LLMRMQFAKQ NGVEANVSTI NLEDNDITEG AILTSLRKAL
101: NQYAKLQAQD GHWPGDYSGI MFIMPLLIFS LHVTGTLNVI LSSEHRREIC RYIYNHQNED GGWSTQVLTK STMFGSCLNY ATLRLLGEIS DGKNDALARG
201: RAWILSHGSA TAAPQWAKIW LSVIGAYDWS GNNAIIPELW MAPHFLPFHP ARFWSFARMV YMPMAYLYGK KFVGPITQTI LEIREELYNI PYNEVDWNRA
301: RDSCAKEDLK YTRSPVQHIV WTCLNKFVEP MLNVWPFNKL RAISLSNLMK HIYYEDEATY HIGLCPINKA LNMICCWVEN PNSDAFRAHL PRIYDYLWLS
401: EDGMKAQVYD GCQSWETSFI VQAIFSTNLI DEFGSTLKKA HEFLKSSQVL HDLPSHQNYY RDRSKGSWTL STADNGWSVP DCTTEIIQAL LYLSKVSADI
501: VGLPIKEERL HDAIDCLLSY ANDDGTFSSS ESKRTASWTE VLNPSESFRN IVVDYLHVEC TSSAMQCFIL FNELYPQDCA EEIKRCIKKA AIFIENQQKN
601: GSWYGTWGVC FTYGAFFAIK GLVAAGRTYD NSIHVRNGCN FLISKQLSGG GWGESYLSSE NEDYVHSGSP HAVSTAWAML ALIYSGQTER DPEPLYRSTK
701: QLIKMQMETG DFPQQEHVGC FNSSLYFNYP NYRNLFPIWA LGEFRCRLLG MKK
101: NQYAKLQAQD GHWPGDYSGI MFIMPLLIFS LHVTGTLNVI LSSEHRREIC RYIYNHQNED GGWSTQVLTK STMFGSCLNY ATLRLLGEIS DGKNDALARG
201: RAWILSHGSA TAAPQWAKIW LSVIGAYDWS GNNAIIPELW MAPHFLPFHP ARFWSFARMV YMPMAYLYGK KFVGPITQTI LEIREELYNI PYNEVDWNRA
301: RDSCAKEDLK YTRSPVQHIV WTCLNKFVEP MLNVWPFNKL RAISLSNLMK HIYYEDEATY HIGLCPINKA LNMICCWVEN PNSDAFRAHL PRIYDYLWLS
401: EDGMKAQVYD GCQSWETSFI VQAIFSTNLI DEFGSTLKKA HEFLKSSQVL HDLPSHQNYY RDRSKGSWTL STADNGWSVP DCTTEIIQAL LYLSKVSADI
501: VGLPIKEERL HDAIDCLLSY ANDDGTFSSS ESKRTASWTE VLNPSESFRN IVVDYLHVEC TSSAMQCFIL FNELYPQDCA EEIKRCIKKA AIFIENQQKN
601: GSWYGTWGVC FTYGAFFAIK GLVAAGRTYD NSIHVRNGCN FLISKQLSGG GWGESYLSSE NEDYVHSGSP HAVSTAWAML ALIYSGQTER DPEPLYRSTK
701: QLIKMQMETG DFPQQEHVGC FNSSLYFNYP NYRNLFPIWA LGEFRCRLLG MKK
001: MWKLKIAEGG SPWLRTTNNH VGRQFWEFDP NLGTPEDLAA VEEARKSFSD NRFVQKHSAD LLMRLQFSRE NLISPVLPQV KIEDTDDVTE EMVETTLKRG
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
101: LDFYSTIQAH DGHWPGDYGG PMFLLPGLII TLSITGALNT VLSEQHKQEM RRYLYNHQNE DGGWGLHIEG PSTMFGSVLN YVTLRLLGEG PNDGDGDMEK
201: GRDWILNHGG ATNITSWGKM WLSVLGAFEW SGNNPLPPEI WLLPYFLPIH PGRMWCHCRM VYLPMSYLYG KRFVGPITST VLSLRKELFT VPYHEVNWNE
301: ARNLCAKEDL YYPHPLVQDI LWASLHKIVE PVLMRWPGAN LREKAIRTAI EHIHYEDENT RYICIGPVNK VLNMLCCWVE DPNSEAFKLH LPRIHDFLWL
401: AEDGMKMQGY NGSQLWDTGF AIQAILATNL VEEYGPVLEK AHSFVKNSQV LEDCPGDLNY WYRHISKGAW PFSTADHGWP ISDCTAEGLK AALLLSKVPK
501: AIVGEPIDAK RLYEAVNVII SLQNADGGLA TYELTRSYPW LELINPAETF GDIVIDYPYV ECTSAAIQAL ISFRKLYPGH RKKEVDECIE KAVKFIESIQ
601: AADGSWYGSW AVCFTYGTWF GVKGLVAVGK TLKNSPHVAK ACEFLLSKQQ PSGGWGESYL SCQDKVYSNL DGNRSHVVNT AWAMLALIGA GQAEVDRKPL
701: HRAARYLINA QMENGDFPQQ EIMGVFNRNC MITYAAYRNI FPIWALGEYR CQVLLQQGE
Arabidopsis Description
CAS1Cycloartenol synthase [Source:UniProtKB/Swiss-Prot;Acc:P38605]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.