Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G15370.1 | Thale cress | cytosol | 80.16 | 80.9 |
| AT4G15340.1 | Thale cress | mitochondrion | 79.37 | 79.37 |
| AT1G78500.2 | Thale cress | cytosol | 74.28 | 74.19 |
| AT5G36150.1 | Thale cress | cytosol | 72.45 | 73.03 |
| AT5G42600.1 | Thale cress | cytosol | 70.1 | 70.56 |
| AT3G29255.1 | Thale cress | cytosol | 64.23 | 69.69 |
| Bra035809.1-P | Field mustard | cytosol | 52.48 | 68.72 |
| Bra035810.1-P | Field mustard | cytosol, mitochondrion | 12.53 | 68.57 |
| CDY29797 | Canola | cytosol | 68.02 | 68.46 |
| CDY25392 | Canola | cytosol | 68.02 | 68.46 |
| CDY25386 | Canola | cytosol, plasma membrane, plastid | 52.35 | 68.43 |
| KRH46975 | Soybean | endoplasmic reticulum | 57.05 | 57.35 |
| AT1G78970.1 | Thale cress | cytosol | 56.53 | 57.2 |
| KRH66676 | Soybean | cytosol | 46.87 | 56.98 |
| KRH44692 | Soybean | endoplasmic reticulum | 56.14 | 56.43 |
| KRH66671 | Soybean | cytosol | 56.14 | 56.43 |
| VIT_09s0054g01210.t01 | Wine grape | cytosol | 55.74 | 56.41 |
| AT1G78950.2 | Thale cress | cytosol, plasma membrane, plastid | 56.27 | 56.12 |
| AT1G78960.2 | Thale cress | cytosol | 55.87 | 56.09 |
| AT1G78955.1 | Thale cress | cytosol | 55.61 | 55.4 |
| KRH11342 | Soybean | cytosol | 49.22 | 54.17 |
| KRH10719 | Soybean | cytosol | 31.59 | 53.07 |
| AT1G66960.2 | Thale cress | mitochondrion | 52.48 | 52.07 |
| KRH66677 | Soybean | cytosol | 8.49 | 47.79 |
| AT2G07050.1 | Thale cress | cytosol | 47.0 | 47.43 |
| TraesCS7D01G004000.1 | Wheat | cytosol | 45.17 | 45.59 |
| TraesCS4A01G495100.1 | Wheat | cytosol | 44.91 | 45.44 |
| TraesCS7A01G003500.1 | Wheat | cytosol | 44.52 | 44.93 |
| AT3G45130.2 | Thale cress | cytosol | 44.78 | 44.9 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 42.56 | 44.23 |
| EES13537 | Sorghum | cytosol | 43.99 | 44.23 |
| Os08t0223900-00 | Rice | cytosol | 44.78 | 43.69 |
| Zm00001d024337_P001 | Maize | cytosol | 40.6 | 43.02 |
| AT1G78480.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 8.09 | 30.69 |
Protein Annotations
| Gene3D:1.50.10.20 | EntrezGene:834852 | MapMan:9.1.4.3 | ProteinID:AED95609.1 | ProteinID:AED95610.1 | EMBL:AK227776 |
| ArrayExpress:AT5G48010 | EnsemblPlantsGene:AT5G48010 | RefSeq:AT5G48010 | TAIR:AT5G48010 | RefSeq:AT5G48010-TAIR-G | EnsemblPlants:AT5G48010.2 |
| TAIR:AT5G48010.2 | EMBL:AY327541 | Unigene:At.29870 | ProteinID:BAB11065.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010263 | GO:GO:0016853 | GO:GO:0016866 | GO:GO:0048364 | GO:GO:0051746 | GO:GO:0080003 |
| RefSeq:NP_001078733.1 | RefSeq:NP_199612.3 | PFAM:PF13243 | PFAM:PF13249 | PO:PO:0009005 | PO:PO:0020100 |
| ScanProsite:PS01074 | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF16 | UniProt:Q9FI37 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N |
| SUPFAM:SSF48239 | InterPro:Squalene_cyclase | Symbol:THAS | TIGRFAMs:TIGR01787 | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0000197086 | SEG:seg | : | : | : | : |
Description
THAS1Thalianol synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9FI37]
Coordinates
chr5:+:19456837..19461706
Molecular Weight (calculated)
88207.3 Da
IEP (calculated)
6.577
GRAVY (calculated)
-0.353
Length
766 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLRTGPKA GEDTHLFTTN NYAGRQIWEF DANAGSPQEI AEVEDARHKF SDNTSRFKTT ADLLWRMQFL REKKFEQKIP RVIIEDARKI KYEDAKTALK
101: RGLLYFTALQ ADDGHWPAEN SGPNFYTPPF LICLYITGHL EKIFTPEHVK ELLRHIYNMQ NEDGGWGLHV ESHSVMFCTV INYVCLRIVG EEVGHDDQRN
201: GCAKAHKWIM DHGGATYTPL IGKALLSVLG VYDWSGCNPI PPEFWLLPSS FPVNGGTLWI YLRDTFMGLS YLYGKKFVAP PTPLILQLRE ELYPEPYAKI
301: NWTQTRNRCG KEDLYYPRSF LQDLFWKSVH MFSESILDRW PLNKLIRQRA LQSTMALIHY HDESTRYITG GCLPKAFHML ACWIEDPKSD YFKKHLARVR
401: EYIWIGEDGL KIQSFGSQLW DTALSLHALL DGIDDHDVDD EIKTTLVKGY DYLKKSQITE NPRGDHFKMF RHKTKGGWTF SDQDQGWPVS DCTAESLECC
501: LFFESMPSEL IGKKMDVEKL YDAVDYLLYL QSDNGGIAAW QPVEGKAWLE WLSPVEFLED TIVEYEYVEC TGSAIAALTQ FNKQFPGYKN VEVKRFITKA
601: AKYIEDMQTV DGSWYGNWGV CFIYGTFFAV RGLVAAGKTY SNCEAIRKAV RFLLDTQNPE GGWGESFLSC PSKKYTPLKG NSTNVVQTAQ ALMVLIMGDQ
701: MERDPLPVHR AAQVLINSQL DNGDFPQQEI MGTFMRTVML HFPTYRNTFS LWALTHYTHA LRRLLP
101: RGLLYFTALQ ADDGHWPAEN SGPNFYTPPF LICLYITGHL EKIFTPEHVK ELLRHIYNMQ NEDGGWGLHV ESHSVMFCTV INYVCLRIVG EEVGHDDQRN
201: GCAKAHKWIM DHGGATYTPL IGKALLSVLG VYDWSGCNPI PPEFWLLPSS FPVNGGTLWI YLRDTFMGLS YLYGKKFVAP PTPLILQLRE ELYPEPYAKI
301: NWTQTRNRCG KEDLYYPRSF LQDLFWKSVH MFSESILDRW PLNKLIRQRA LQSTMALIHY HDESTRYITG GCLPKAFHML ACWIEDPKSD YFKKHLARVR
401: EYIWIGEDGL KIQSFGSQLW DTALSLHALL DGIDDHDVDD EIKTTLVKGY DYLKKSQITE NPRGDHFKMF RHKTKGGWTF SDQDQGWPVS DCTAESLECC
501: LFFESMPSEL IGKKMDVEKL YDAVDYLLYL QSDNGGIAAW QPVEGKAWLE WLSPVEFLED TIVEYEYVEC TGSAIAALTQ FNKQFPGYKN VEVKRFITKA
601: AKYIEDMQTV DGSWYGNWGV CFIYGTFFAV RGLVAAGKTY SNCEAIRKAV RFLLDTQNPE GGWGESFLSC PSKKYTPLKG NSTNVVQTAQ ALMVLIMGDQ
701: MERDPLPVHR AAQVLINSQL DNGDFPQQEI MGTFMRTVML HFPTYRNTFS LWALTHYTHA LRRLLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.