Factsheet for AT1G66960.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
golgi 1
mitochondrion 4
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G78960.2	Thale cress	cytosol	77.98	78.9
AT1G78970.1	Thale cress	cytosol	72.8	74.24
AT1G78955.1	Thale cress	cytosol	68.52	68.79
AT1G78950.2	Thale cress	cytosol, plasma membrane, plastid	67.75	68.1
CDY20916	Canola	cytosol	21.63	66.01
Solyc12g035450.1.1	Tomato	cytosol, plasma membrane, plastid	12.31	55.23
AT2G07050.1	Thale cress	cytosol	53.76	54.68
AT1G78500.2	Thale cress	cytosol	53.63	53.98
AT5G42600.1	Thale cress	cytosol	52.98	53.75
AT5G36150.1	Thale cress	cytosol	52.59	53.42
Solyc12g035460.1.1	Tomato	cytosol	15.54	53.33
AT5G48010.2	Thale cress	cytosol	52.07	52.48
AT4G15370.1	Thale cress	cytosol	51.55	52.44
AT4G15340.1	Thale cress	mitochondrion	51.94	52.35
AT3G45130.2	Thale cress	cytosol	50.78	51.31
TraesCS4A01G495100.1	Wheat	cytosol	50.26	51.26
TraesCS7A01G003500.1	Wheat	cytosol	49.74	50.59
AT3G29255.1	Thale cress	cytosol	46.24	50.57
TraesCS7D01G004000.1	Wheat	cytosol	49.61	50.46
EES13537	Sorghum	cytosol	48.96	49.61
Os08t0223900-00	Rice	cytosol	49.61	48.79
Zm00001d024337_P001	Maize	cytosol	44.95	47.99
HORVU7Hr1G000400.1	Barley	cytosol, plastid	45.73	47.9
AT1G78480.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	10.62	40.59

Protein Annotations

Gene3D:1.50.10.20	EntrezGene:843014	MapMan:9.1.4.3	UniProt:A0A1P8AW29	ProteinID:ANM60853.1	ArrayExpress:AT1G66960
EnsemblPlantsGene:AT1G66960	RefSeq:AT1G66960	TAIR:AT1G66960	RefSeq:AT1G66960-TAIR-G	EnsemblPlants:AT1G66960.2	Unigene:At.58861
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016853	GO:GO:0016866	RefSeq:NP_001323106.1	PFAM:PF13243	PFAM:PF13249	ScanProsite:PS01074
PANTHER:PTHR11764	PANTHER:PTHR11764:SF16	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	SUPFAM:SSF48239	InterPro:Squalene_cyclase
TIGRFAMs:TIGR01787	TMHMM:TMhelix	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0008495E2A	SEG:seg

Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G66960]

Coordinates

chr1:-:24984915..24992043

Molecular Weight (calculated)

88798.0 Da

IEP (calculated)

7.054

GRAVY (calculated)

-0.280

Length

772 amino acids

Sequence
(BLAST)

001: MKKTWRIIIM WRLKVGEGKG KDPYLFSSNN FVGRQTWEFD PKAGTREERT AVEEARRSFF DNRSRVKPSS DLLWKMQFLK EAKFEQVIPP VKIDGGEAIT
101: YEKATNALRR GVAFLSALQA SDGHWPGEFT GPLCMLPPLV FCLYITGHLE EVFDAEHRKE MLRYIYCHQN EDGGWGFHIE SKSIMFTTTL NYICLRILGV
201: GPDGGLENAC KRARQWILSH GGVIYIPCWG KVWLSVLGIY DWSGVNPMPP EIWLLPYFLP IHLGKAFSYT RITYMPISYL YGKKFVGQIT PLIMQLREEL
301: HLQPYEEINW NKARHLCAKE DKYYPHPLVQ DLIWDALHTF VEPLLASWPI NKLVRKKALQ VAMKHIHYED ENSHYITIGC IEKNLCMLAC WIDNPDGNHF
401: KKHLSRIPDM MWVAEDGMKM QCFGSQLWMT GFAVQALLAS DPRDETYDVL RRAHDYIKKS QVRDNPSGDF KSMYRHISKG GWTLSDRDHG WQVSDCTAEA
501: AKCCMLLSTM PTDITGEKIN LEQLYDSVNL MLSLQSENGG FTAWEPVRAY KWMELMNPTD LFANAMTERE YTECTSAVLQ ALVIFNQLYP DHRTKEITKS
601: IEKAVQFIES KQLRDGSWYG SWGICFTYGT WFALCGLAAI GKTYNNCLSM RDGVHFLLNI QNEDGGWGES YMSCPEQRYI PLEGNRSNVV QTAWAMMALI
701: HAGQAKRDLI PLHSAAKFII TSQLENGDFP QQELLGASMS TCMLHYSTYK DIFPPWALAE YRKAAFIHHA DL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.