Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d035389_P001 | Maize | cytosol, nucleus, peroxisome | 97.01 | 38.94 |
OQU83221 | Sorghum | cytosol | 88.03 | 26.89 |
TraesCS5B01G545900.1 | Wheat | cytosol | 75.64 | 24.21 |
HORVU5Hr1G122220.1 | Barley | mitochondrion | 77.78 | 23.98 |
Os11t0189600-01 | Rice | cytosol, mitochondrion | 75.64 | 23.32 |
Zm00001d030822_P001 | Maize | cytosol | 19.23 | 22.73 |
Zm00001d030824_P001 | Maize | cytosol | 31.2 | 22.32 |
Zm00001d053889_P004 | Maize | cytosol | 70.94 | 21.84 |
Zm00001d015234_P002 | Maize | cytosol | 70.94 | 21.78 |
Zm00001d008671_P001 | Maize | cytosol | 49.15 | 21.7 |
Zm00001d030818_P001 | Maize | cytosol | 20.94 | 21.68 |
Zm00001d050625_P001 | Maize | mitochondrion | 54.27 | 19.13 |
Zm00001d015239_P007 | Maize | mitochondrion | 54.7 | 16.8 |
Zm00001d014695_P001 | Maize | cytosol | 55.13 | 16.67 |
Zm00001d030814_P001 | Maize | cytosol | 18.38 | 16.1 |
Zm00001d052971_P005 | Maize | mitochondrion | 51.71 | 16.01 |
Zm00001d013798_P001 | Maize | mitochondrion | 49.57 | 15.4 |
Zm00001d024337_P001 | Maize | cytosol | 43.59 | 14.11 |
Zm00001d008674_P001 | Maize | mitochondrion | 28.63 | 12.93 |
Zm00001d030819_P005 | Maize | cytosol | 7.69 | 4.79 |
CDX85103 | Canola | cytosol | 0.85 | 1.89 |
Zm00001d030821_P001 | Maize | cytosol | 0.0 | 0.0 |
Zm00001d008672_P001 | Maize | cytosol | 0.0 | 0.0 |
Zm00001d030813_P001 | Maize | cytosol | 0.0 | 0.0 |
VIT_11s0065g00050.t01 | Wine grape | cytosol, golgi, nucleus | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:Zm00001d035392_P001 | EnsemblPlants:Zm00001d035392_T001 | EnsemblPlantsGene:Zm00001d035392 | Gene3D:1.50.10.20 | InterPro:SQ_cyclase_N | InterPro:Terpenoid_cyclase/PrenylTrfase |
PANTHER:PTHR11764 | PANTHER:PTHR11764:SF36 | PFAM:PF13249 | ProteinID:AQK78938.1 | SUPFAM:SSF48239 | UniParc:UPI0008DB342B |
UniProt:A0A1D6LG93 | MapMan:9.1.4.3 | : | : | : | : |
Description
Cycloartenol synthase
Coordinates
chr6:-:24057841..24071799
Molecular Weight (calculated)
27295.2 Da
IEP (calculated)
7.588
GRAVY (calculated)
-0.166
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSALNYVA LRLLGESPNG GDGAMEKSRK WILDHGGATF TAAWGKFWLT VLGVYDWSGV NPVPPEFWLL PYYLPFHPGR MSCYCRMVYL PMSYIYGRRF
101: VGPITPLVME LRKELYTDAY DEIDWNKART ECAKEDMYNP HSLVLGISWT ILHKFEPIMF HWPWRKLRNK ALAFIMRHIH YEDESTHYIN MGAVPKALSM
201: LACWIEDPDS EAFKCHIARV PDYLWIAKDG MKMQ
101: VGPITPLVME LRKELYTDAY DEIDWNKART ECAKEDMYNP HSLVLGISWT ILHKFEPIMF HWPWRKLRNK ALAFIMRHIH YEDESTHYIN MGAVPKALSM
201: LACWIEDPDS EAFKCHIARV PDYLWIAKDG MKMQ
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.