Factsheet for Zm00001d030814_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030824_P001	Maize	cytosol	89.51	73.09
Zm00001d030818_P001	Maize	cytosol	49.44	58.41
KRH38081	Soybean	cytosol	11.24	40.54
KXG23805	Sorghum	cytosol	85.77	30.25
Zm00001d052971_P005	Maize	mitochondrion	59.93	21.16
Zm00001d050625_P001	Maize	mitochondrion	51.31	20.63
Zm00001d015239_P007	Maize	mitochondrion	58.8	20.6
Zm00001d013798_P001	Maize	mitochondrion	56.93	20.19
Zm00001d014695_P001	Maize	cytosol	57.68	19.9
KXG35171	Sorghum	extracellular	44.57	18.86
Zm00001d035392_P001	Maize	cytosol	16.1	18.38
Zm00001d008674_P001	Maize	mitochondrion	34.83	17.95
Zm00001d024337_P001	Maize	cytosol	44.19	16.32
Zm00001d053889_P004	Maize	cytosol	44.19	15.53
Zm00001d015234_P002	Maize	cytosol	43.82	15.35
VIT_10s0003g03550.t01	Wine grape	extracellular	4.12	11.0
Zm00001d035389_P001	Maize	cytosol, nucleus, peroxisome	23.6	10.81
Zm00001d008671_P001	Maize	cytosol	20.22	10.19
Zm00001d030822_P001	Maize	cytosol	0.75	1.01
Zm00001d030813_P001	Maize	cytosol	0.75	0.81
Zm00001d030819_P005	Maize	cytosol	0.75	0.53
Zm00001d030821_P001	Maize	cytosol	0.0	0.0
Zm00001d008672_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d030814_P001	EnsemblPlants:Zm00001d030814_T001	EnsemblPlantsGene:Zm00001d030814	Gene3D:1.50.10.20	InterPro:SQ_cyclase_N	InterPro:Terpenoid_cyclase/PrenylTrfase
PANTHER:PTHR11764	PANTHER:PTHR11764:SF23	PFAM:PF13249	ProteinID:ONM01572.1	SUPFAM:SSF48239	UniParc:UPI0008457E26
UniProt:A0A1D6KEK0	MapMan:9.1.4.3	:	:	:	:

Description

Cycloartenol synthase

Coordinates

chr1:-:161427099..161429557

Molecular Weight (calculated)

30753.6 Da

IEP (calculated)

5.794

GRAVY (calculated)

-0.473

Length

267 amino acids

Sequence
(BLAST)

001: MWRLKIGEGG GPWMQTVSGF HGRQVWEYDP DAGTDEERRK VEQLRRAFTE NRFQRRESQD LLMRMQFTGQ KHLHADDMPA AFAKIEEGDE VTEERLRESL
101: KRAMDWMSAL QAEDGHWPGD FSGIMYMMPF WIFALHITGT VDAVLSKEHR REICRHIYNH QNEDGGWGFN IIDESAMFST CLNYTSLRLL GEVQQEENDG
201: LAKGREWILS HGTATAAPQW AKILLSVIGV YDWRGNNPVV PELWLVPRFL PIHPGIFLLP PSASLKA

Best Arabidopsis Sequence Match ( AT1G66960.1 )
(BLAST)

001: MWRLKVGEGK GKDPYLFSSN NFVGRQTWEF DPKAGTREER TAVEEARRSF FDNRSRVKPS SDLLWKMQFL KEAKFEQVIP PVKIDGGEAI TYEKATNALR
101: RGVAFLSALQ ASDGHWPGEF TGPLCMLPPL VFCLYITGHL EEVFDAEHRK EMLRYIYCHQ NEDGGWGFHI ESKSIMFTTT LNYICLRILG VGPDGGLENA
201: CKRARQWILS HGGVIYIPCW GKVWLSVLGI YDWSGVNPMP PEIWLLPYFL PIHLGKAFSY TRITYMPISY LYGKKFVGQI TPLIMQLREE LHLQPYEEIN
301: WNKARHLCAK EDKYYPHPLV QDLIWDALHT FVEPLLASWP INKLVRKKAL QVAMKHIHYE DENSHYITIG CIEKNLCMLA CWIDNPDGNH FKKHLSRIPD
401: MMWVAEDGMK MQCFGSQLWM TGFAVQALLA SDPRDETYDV LRRAHDYIKK SQVRDNPSGD FKSMYRHISK GGWTLSDRDH GWQVSDCTAE AAKCCMLLST
501: MPTDITGEKI NLEQLYDSVN LMLSLQSENG GFTAWEPVRA YKWMELMNPT DLFANAMTER EYTECTSAVL QALVIFNQLY PDHRTKEITK SIEKAVQFIE
601: SKQLRDGSWY GSWGICFTYG TWFALCGLAA IGKTYNNCLS MRDGVHFLLN IQNEDGGWGE SYMSCPEQRY IPLEGNRSNV VQTAWAMMAL IHAGQAKRDL
701: IPLHSAAKFI ITSQLENGDF PQQELLGASM STCMLHYSTY KDIFPPWALA EYRKAAFIHH ADL

Arabidopsis Description

Terpenoid cyclases family protein [Source:TAIR;Acc:AT1G66960]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.