Factsheet for Zm00001d035389_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035392_P001	Maize	cytosol	38.94	97.01
OQU83221	Sorghum	cytosol	61.41	46.74
CDX85103	Canola	cytosol	7.72	42.45
HORVU5Hr1G122220.1	Barley	mitochondrion	54.72	42.03
Os11t0189600-01	Rice	cytosol, mitochondrion	54.37	41.77
TraesCS5B01G545900.1	Wheat	cytosol	51.8	41.31
Zm00001d015234_P002	Maize	cytosol	50.43	38.58
Zm00001d053889_P004	Maize	cytosol	49.4	37.89
Zm00001d030821_P001	Maize	cytosol	4.8	37.33
Zm00001d008671_P001	Maize	cytosol	33.79	37.17
Zm00001d050625_P001	Maize	mitochondrion	38.08	33.43
Zm00001d015239_P007	Maize	mitochondrion	39.79	30.45
Zm00001d052971_P005	Maize	mitochondrion	37.56	28.97
Zm00001d030824_P001	Maize	cytosol	16.12	28.75
Zm00001d013798_P001	Maize	mitochondrion	36.71	28.42
Zm00001d014695_P001	Maize	cytosol	37.22	28.04
Zm00001d024337_P001	Maize	cytosol	34.48	27.8
Zm00001d008674_P001	Maize	mitochondrion	24.36	27.41
Zm00001d030822_P001	Maize	cytosol	9.09	26.77
Zm00001d030818_P001	Maize	cytosol	9.78	25.22
Zm00001d030814_P001	Maize	cytosol	10.81	23.6
Zm00001d030819_P005	Maize	cytosol	13.21	20.48
VIT_11s0065g00050.t01	Wine grape	cytosol, golgi, nucleus	1.89	16.42
Zm00001d030813_P001	Maize	cytosol	6.52	15.45
Zm00001d008672_P001	Maize	cytosol	1.2	5.98

Protein Annotations

EnsemblPlants:Zm00001d035389_P001	EnsemblPlants:Zm00001d035389_T001	EnsemblPlantsGene:Zm00001d035389	Gene3D:1.50.10.20	GO:GO:0003674	GO:GO:0003824
GO:GO:0016866	InterPro:SQ_cyclase_C	InterPro:SQ_cyclase_N	InterPro:Terpene_synthase_CS	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR11764
PANTHER:PTHR11764:SF36	PFAM:PF13243	PFAM:PF13249	ProteinID:AQK78935.1	ScanProsite:PS01074	SUPFAM:SSF48239
UniParc:UPI000842640D	UniProt:A0A1D6LG90	MapMan:9.1.4.3	:	:	:

Description

Cycloartenol synthase

Coordinates

chr6:-:23996601..24010418

Molecular Weight (calculated)

66124.1 Da

IEP (calculated)

7.278

GRAVY (calculated)

-0.235

Length

583 amino acids

Sequence
(BLAST)

001: MLSSSGPCNS YTDTNEPLRS GNAGSSPNRE MRSTEQERAP YLDLAEFRGE GSFYIAVVVR IKVTHYVLTP YLCAQITTLY VSGVLNTVLS SEHQKEILRY
101: IYNHQNEDGG WGLHIEGHST MLSSALNYVA LRLLGESPNG GDGAMEKSRK WILDHGGATF TAAWGKVLGV YDWSGVNPVP PEFWLLPYYL PFHPGRMSCY
201: CRMVYLPMSY IYGRRFVGPI TPLVMELRKE LYTDAYDEID WNKARTECAK EDMYNPHSLV LGISWTILHK FEPIMFHWPW RKLRNKALAF IMRHIHYEDE
301: STHYINLGAV SKALSMLACW IEDPDSEAFK CHIARVPDYL WIAKDGMKTQ LTGMSNVSSA IQALALFRKL NPGHRKEEVE NCVSKGADFI QNIQRTDGSW
401: YGSWGVCFTY AAWFGVTGLV CAGRTFENCT AIKKACDFLL SKELPSGGWG ESWLSAHNEV YTNLNGNRPH GTNTAWALLA LIEAGQAERD PVPLHRAAKV
501: LLNLQLEDGD EFPQQLLYAK DPILIYYHLQ HYADKNVYNR RSLEFSYKLP WLVTPLTGIS FLSGLSQSIA VRCCLQARNR NMI

Best Arabidopsis Sequence Match ( AT1G78960.1 )
(BLAST)

001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL

Arabidopsis Description

LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.