Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G545900.1 | Wheat | cytosol | 84.45 | 87.69 |
| Os11t0189600-01 | Rice | cytosol, mitochondrion | 81.03 | 81.03 |
| Zm00001d035392_P001 | Maize | cytosol | 23.98 | 77.78 |
| OQU83221 | Sorghum | cytosol | 78.13 | 77.42 |
| HORVU6Hr1G019840.10 | Barley | mitochondrion | 66.01 | 63.34 |
| VIT_11s0065g00050.t01 | Wine grape | cytosol, golgi, nucleus | 5.27 | 59.7 |
| CDX85103 | Canola | cytosol | 8.04 | 57.55 |
| HORVU0Hr1G022520.1 | Barley | mitochondrion | 24.64 | 55.99 |
| HORVU6Hr1G020020.1 | Barley | mitochondrion | 37.15 | 55.62 |
| HORVU7Hr1G047800.10 | Barley | mitochondrion | 50.86 | 55.54 |
| HORVU7Hr1G047790.3 | Barley | cytosol, extracellular | 5.67 | 55.13 |
| Zm00001d035389_P001 | Maize | cytosol, nucleus, peroxisome | 42.03 | 54.72 |
| HORVU0Hr1G022610.20 | Barley | cytosol | 31.36 | 52.19 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 49.01 | 50.47 |
| HORVU0Hr1G025390.3 | Barley | endoplasmic reticulum | 49.14 | 48.07 |
| HORVU6Hr1G019760.1 | Barley | mitochondrion | 4.35 | 44.59 |
| HORVU6Hr1G019940.2 | Barley | nucleus | 22.79 | 44.13 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G122220.1 | EnsemblPlantsGene:HORVU5Hr1G122220 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016853 |
| GO:GO:0016866 | InterPro:SQ_cyclase_C | InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpene_synthase_CS | InterPro:Terpenoid_cyclase/PrenylTrfase |
| PANTHER:PTHR11764 | PANTHER:PTHR11764:SF27 | PFAM:PF13243 | PFAM:PF13249 | ScanProsite:PS01074 | SEG:seg |
| SUPFAM:SSF48239 | TIGRFAMs:TIGR01787 | UniParc:UPI000B47C156 | UniProt:A0A287SZY1 | MapMan:9.1.4.3 | : |
Description
Terpene cyclase/mutase family member [Source:UniProtKB/TrEMBL;Acc:A0A287SZY1]
Coordinates
chrchr5H:-:661581336..661617610
Molecular Weight (calculated)
86589.3 Da
IEP (calculated)
6.542
GRAVY (calculated)
-0.336
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKMSEGS SPWLRSTNNL LGRQVWEFDP EHGTPEERAE VEKARRVFTQ HRFERKHSSD LLMRMQLAKA NPQELDFRVV KLGEHEDVTE ETVWSSLKRA
101: VSRVCNLQAH DGHWPNDYGG LLFLLPGLIT TLYVTGALNT VLSLEHKKEM LRYIYNHQNG DGGWGMHIEG HSTMLGSSLN YVALRLLGEG PNGGDGAIEK
201: GRNWILDHGG ATFAPSWGKF WLSVLGAYDW SGTNPVPPEL WLLPYQLPFH PGRFACYIRM VYLPMSYIYG RKFVGRVTPV ILELRNELYR VPYDEIDWNK
301: ARTECAKEDM YNPHSLVKDI LSFILQKFVE PVLSHWPGKK LREKALANVM RHIHYEDECT RYVNLGAVPK PLNMLACWIE DPNSEAFKCH IPRVYDYIWI
401: AEDGMKMQIY DGSQVWDAGF TVEALVGTDL VNELGPTLKR APSSLKNSQL LEDFPGDFNH TYRHICKGGW TFTTADDGWQ VSDCTATALK ACLLLSKMSP
501: EIVGKPLEIY RQYDGINVLM SFMNKDGGFS SFELVRSYAW LEDFNPSDSF GRVMIEYPYV ECTSSSIQCL ALFRELNPGH RKEEVENCIR KGADFIESSQ
601: RSDGSWYGSW GICFTYATWF GVAGLVSVGK TFENSVAIRK ACDFLLSKEL PSGGWGESYL SSHDEVYTNL KGNRPHGTHT AWAMLSLIDA GQEERDPMPL
701: HRAAKVLLNL QLDDGEFPQQ EIIGVFLQTA MASYSHYRNV FPIWALTEYR RRVLLAGRK
101: VSRVCNLQAH DGHWPNDYGG LLFLLPGLIT TLYVTGALNT VLSLEHKKEM LRYIYNHQNG DGGWGMHIEG HSTMLGSSLN YVALRLLGEG PNGGDGAIEK
201: GRNWILDHGG ATFAPSWGKF WLSVLGAYDW SGTNPVPPEL WLLPYQLPFH PGRFACYIRM VYLPMSYIYG RKFVGRVTPV ILELRNELYR VPYDEIDWNK
301: ARTECAKEDM YNPHSLVKDI LSFILQKFVE PVLSHWPGKK LREKALANVM RHIHYEDECT RYVNLGAVPK PLNMLACWIE DPNSEAFKCH IPRVYDYIWI
401: AEDGMKMQIY DGSQVWDAGF TVEALVGTDL VNELGPTLKR APSSLKNSQL LEDFPGDFNH TYRHICKGGW TFTTADDGWQ VSDCTATALK ACLLLSKMSP
501: EIVGKPLEIY RQYDGINVLM SFMNKDGGFS SFELVRSYAW LEDFNPSDSF GRVMIEYPYV ECTSSSIQCL ALFRELNPGH RKEEVENCIR KGADFIESSQ
601: RSDGSWYGSW GICFTYATWF GVAGLVSVGK TFENSVAIRK ACDFLLSKEL PSGGWGESYL SSHDEVYTNL KGNRPHGTHT AWAMLSLIDA GQEERDPMPL
701: HRAAKVLLNL QLDDGEFPQQ EIIGVFLQTA MASYSHYRNV FPIWALTEYR RRVLLAGRK
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.