Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0140500-00 | Rice | mitochondrion | 10.65 | 60.67 |
| HORVU0Hr1G022520.1 | Barley | mitochondrion | 39.65 | 60.18 |
| Zm00001d050625_P001 | Maize | mitochondrion | 71.6 | 54.67 |
| EES04501 | Sorghum | cytosol | 78.7 | 53.99 |
| Os11t0562100-01 | Rice | plasma membrane | 74.36 | 49.48 |
| KXG29446 | Sorghum | endoplasmic reticulum, extracellular | 62.52 | 49.3 |
| HORVU7Hr1G047800.10 | Barley | mitochondrion | 64.5 | 47.05 |
| HORVU6Hr1G019760.1 | Barley | mitochondrion | 6.71 | 45.95 |
| HORVU5Hr1G122220.1 | Barley | mitochondrion | 55.62 | 37.15 |
| HORVU0Hr1G025390.3 | Barley | endoplasmic reticulum | 53.06 | 34.66 |
| Os02t0140200-01 | Rice | mitochondrion, plasma membrane, vacuole | 33.53 | 34.34 |
| HORVU6Hr1G019840.10 | Barley | mitochondrion | 53.06 | 34.01 |
| HORVU7Hr1G000400.1 | Barley | cytosol, plastid | 44.97 | 30.94 |
| Os02t0140400-01 | Rice | cytosol | 25.25 | 29.84 |
| HORVU0Hr1G022610.20 | Barley | cytosol | 22.29 | 24.78 |
| VIT_10s0003g03550.t01 | Wine grape | extracellular | 2.76 | 14.0 |
| HORVU6Hr1G019940.2 | Barley | nucleus | 6.71 | 8.67 |
| HORVU7Hr1G047790.3 | Barley | cytosol, extracellular | 0.39 | 2.56 |
| TraesCS4A01G498900.1 | Wheat | cytosol | 0.39 | 2.17 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G020020.1 | EnsemblPlantsGene:HORVU6Hr1G020020 | Gene3D:1.50.10.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016866 |
| InterPro:SQ_cyclase_N | InterPro:Squalene_cyclase | InterPro:Terpenoid_cyclase/PrenylTrfase | PANTHER:PTHR11764 | PANTHER:PTHR11764:SF23 | PFAM:PF13249 |
| SUPFAM:SSF48239 | TIGRFAMs:TIGR01787 | UniParc:UPI000B45FCE9 | UniProt:A0A287TIP3 | MapMan:9.1.4.3 | : |
Description
No Description!
Coordinates
chrchr6H:+:55418153..55449956
Molecular Weight (calculated)
58190.9 Da
IEP (calculated)
6.769
GRAVY (calculated)
-0.257
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRLKVGEGG GPWLRSTNGF LGRAVWEFDA GAGTPEERAA VEKVRQEFTD GRFRRRESAD LLMRLQYAQQ NKHQGRDRCL PPMQKLEEKD KVTEETVLVS
101: LRRALDQVSL LQSDDGCWPG DFSGIMFIMP GLIFALYVTR SLNTLVTPEH RREICRYIYN HQNEDGGWGT LILGSSSMFG TCSNYITLRL LGEELDGNGA
201: LANGRQWILS HGGATLVPQW GKIWLSILGV YDWSGNNPIF PELWLAPQFL PFHPGKFWCL CRMVYLPMAY LYGKKFVGPI TPIILALREE IYDMPYHKIN
301: WGMSRNACAK EDLVCPRTML QNVVWTSLYK CMEPMLSSWP ISKLRDRALK NLMEHIHYED DNTQYLCICT VNKALNMVCC WVEDPSSEAF KRHLARVPDF
401: LWISEDGMKA QVYDGVQSWE TSFIIQAYCA TDLESEYGPT LERANAFMKK SQVLWNHPGD QSYSHRHRSK GSWTLSSADN GWSVSDTTAE ALKVFFYILL
501: LVCEIIY
101: LRRALDQVSL LQSDDGCWPG DFSGIMFIMP GLIFALYVTR SLNTLVTPEH RREICRYIYN HQNEDGGWGT LILGSSSMFG TCSNYITLRL LGEELDGNGA
201: LANGRQWILS HGGATLVPQW GKIWLSILGV YDWSGNNPIF PELWLAPQFL PFHPGKFWCL CRMVYLPMAY LYGKKFVGPI TPIILALREE IYDMPYHKIN
301: WGMSRNACAK EDLVCPRTML QNVVWTSLYK CMEPMLSSWP ISKLRDRALK NLMEHIHYED DNTQYLCICT VNKALNMVCC WVEDPSSEAF KRHLARVPDF
401: LWISEDGMKA QVYDGVQSWE TSFIIQAYCA TDLESEYGPT LERANAFMKK SQVLWNHPGD QSYSHRHRSK GSWTLSSADN GWSVSDTTAE ALKVFFYILL
501: LVCEIIY
001: MWKLKIGEGN GEDPYLFSSN NFVGRQTWEF DPKAGTPEER AAVEDARRNY LDNRPRVKGC SDLLWRMQFL KEAKFEQVIP PVKIDDGEGI TYKNATDALR
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
101: RAVSFYSALQ SSDGHWPAEI TGTLFFLPPL VFCFYITGHL EKIFDAEHRK EMLRHIYCHQ NEDGGWGLHI EGKSVMFCTV LNYICLRMLG EGPNGGRNNA
201: CKRARQWILD HGGVTYIPSW GKIWLSILGI YDWSGTNPMP PEIWLLPSFF PIHLGKTLCY TRMVYMPMSY LYGKRFVGPL TPLIMLLRKE LHLQPYEEIN
301: WNKARRLCAK EDMIYPHPLV QDLLWDTLHN FVEPILTNWP LKKLVREKAL RVAMEHIHYE DENSHYITIG CVEKVLCMLA CWIENPNGDH FKKHLARIPD
401: FMWVAEDGLK MQSFGSQLWD TVFAIQALLA CDLSDETDDV LRKGHSFIKK SQVRENPSGD FKSMYRHISK GAWTLSDRDH GWQVSDCTAE ALKCCMLLSM
501: MPAEVVGQKI DPEQLYDSVN LLLSLQGEKG GLTAWEPVRA QEWLELLNPT DFFTCVMAER EYVECTSAVI QALVLFKQLY PDHRTKEIIK SIEKGVQFIE
601: SKQTPDGSWH GNWGICFIYA TWFALSGLAA AGKTYKSCLA VRKGVDFLLA IQEEDGGWGE SHLSCPEQRY IPLEGNRSNL VQTAWAMMGL IHAGQAERDP
701: TPLHRAAKLI ITSQLENGDF PQQEILGVFM NTCMLHYATY RNIFPLWALA EYRKAAFATH QDL
Arabidopsis Description
LUP2Amyrin synthase LUP2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.