Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G258900.1 | Wheat | plastid | 100.0 | 100.0 |
| TraesCSU01G217700.1 | Wheat | plastid | 100.0 | 100.0 |
| TraesCS7D01G259800.1 | Wheat | plastid | 98.51 | 98.51 |
| TraesCS7B01G156400.1 | Wheat | plastid | 97.77 | 97.77 |
| HORVU7Hr1G053840.1 | Barley | golgi | 79.9 | 89.69 |
| Os08t0529200-00 | Rice | plastid | 66.75 | 64.35 |
| Zm00001d031600_P001 | Maize | plastid | 61.79 | 63.04 |
| EES14199 | Sorghum | plastid | 61.79 | 62.72 |
| TraesCSU01G021400.1 | Wheat | cytosol | 23.33 | 24.61 |
Protein Annotations
| EnsemblPlants:TraesCSU01G218600.1 | EnsemblPlantsGene:TraesCSU01G218600 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF57 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SUPFAM:SSF54631 | MapMan:35.1 |
Description
No Description!
Coordinates
chrUn:-:322421544..322422755
Molecular Weight (calculated)
42302.2 Da
IEP (calculated)
8.413
GRAVY (calculated)
0.215
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHIVFLRAA AADLTAGKPS LAGVPSSAPL SAAAAVIPSS PEAAVAVWRD GASPLAPLAA TVVGLLSSLD VVAFVASHAR GGGAEADAMR TPVGEVVPRE
101: PALVREVEPD ARLIEIMDLM KQGARRVLVR KNFTEGCPIN KQPFAPFYKA ALKITGTPRA AATQTVSRSW SSTFGCDKYC CLTREDIVRF LINCLGALAP
201: IPLQSISSLG AISRGYCHVD ASSPAMEVVW KIPSDPRAVA VVRTNRDGSH VILGEISAHK LWKRDHVAAA DAMARLSALH FATGIDENGA APAAANGVGA
301: GARRGEVEND IVPSPRSMRF SSRRIGFSAC LASQMVPSHR ENTVLTCKTT SSLAAVMAQM LAHRATHLWV VQGDDTEEAI LVGMVGYMDI FNAVTSGVLV
401: LPA
101: PALVREVEPD ARLIEIMDLM KQGARRVLVR KNFTEGCPIN KQPFAPFYKA ALKITGTPRA AATQTVSRSW SSTFGCDKYC CLTREDIVRF LINCLGALAP
201: IPLQSISSLG AISRGYCHVD ASSPAMEVVW KIPSDPRAVA VVRTNRDGSH VILGEISAHK LWKRDHVAAA DAMARLSALH FATGIDENGA APAAANGVGA
301: GARRGEVEND IVPSPRSMRF SSRRIGFSAC LASQMVPSHR ENTVLTCKTT SSLAAVMAQM LAHRATHLWV VQGDDTEEAI LVGMVGYMDI FNAVTSGVLV
401: LPA
001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
Arabidopsis Description
CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.