Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14199 | Sorghum | plastid | 89.62 | 89.17 |
| TraesCS7B01G156400.1 | Wheat | plastid | 63.8 | 62.53 |
| TraesCS7D01G259800.1 | Wheat | plastid | 63.54 | 62.28 |
| TraesCS7A01G258900.1 | Wheat | plastid | 63.04 | 61.79 |
| TraesCSU01G217700.1 | Wheat | plastid | 63.04 | 61.79 |
| TraesCSU01G218600.1 | Wheat | plastid | 63.04 | 61.79 |
| HORVU7Hr1G053840.1 | Barley | golgi | 55.44 | 61.0 |
| Os08t0529200-00 | Rice | plastid | 62.28 | 58.85 |
| Zm00001d042343_P001 | Maize | extracellular | 41.01 | 39.8 |
| Zm00001d032560_P001 | Maize | plastid | 21.52 | 22.67 |
| Zm00001d013933_P001 | Maize | cytosol, plastid | 21.01 | 22.19 |
| Zm00001d017375_P001 | Maize | plastid | 22.28 | 21.26 |
Protein Annotations
| EnsemblPlants:Zm00001d031600_P001 | EnsemblPlants:Zm00001d031600_T001 | EnsemblPlantsGene:Zm00001d031600 | EntrezGene:103642878 | PANTHER:PTHR13780 | PANTHER:PTHR13780:SF57 |
| ProteinID:ONM03193.1 | SEG:seg | SUPFAM:SSF54631 | UniParc:UPI0002217699 | UniProt:A0A1D6KJT8 | MapMan:35.1 |
Description
CBS domain-containing protein CBSX6
Coordinates
chr1:-:195876042..195877707
Molecular Weight (calculated)
41281.4 Da
IEP (calculated)
7.630
GRAVY (calculated)
0.150
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHIVFLRTA AADLTAGKPP LRGVPASAPL SAAAAAIPAS QEADVAVWRD GASPLAPAAA TVIGLLSSLD VVAFLASHLG DAAAAMRTPA GDVVAHEPTL
101: VREVEPHTRL IEIVELMKQG ARRVLVRKNI TEACTVVDKR PFAPFYKAVL KITGTPRLSA SEKAVGRQSP PSISTTTAFG CDRYCCLTRE DIVRFLINCL
201: GALAPTPLQS ISSLGAVNRG YAHVEASSPA IESSWRVPAE PRAVAVVQTN RDGSHKVLAD VSAHRLWRRD YAAAADSMAS LSSLNFAAGV NGHGVAAPDE
301: DGDAHVAAPS TSRLHGGKAA FESSLVDQMM MASHGGNAAL RCRSTSSLAA VMAQMLSYRT THIWVTDGED DVLVGVVGYM EIFNAVTRGV ALPPA
101: VREVEPHTRL IEIVELMKQG ARRVLVRKNI TEACTVVDKR PFAPFYKAVL KITGTPRLSA SEKAVGRQSP PSISTTTAFG CDRYCCLTRE DIVRFLINCL
201: GALAPTPLQS ISSLGAVNRG YAHVEASSPA IESSWRVPAE PRAVAVVQTN RDGSHKVLAD VSAHRLWRRD YAAAADSMAS LSSLNFAAGV NGHGVAAPDE
301: DGDAHVAAPS TSRLHGGKAA FESSLVDQMM MASHGGNAAL RCRSTSSLAA VMAQMLSYRT THIWVTDGED DVLVGVVGYM EIFNAVTRGV ALPPA
001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
Arabidopsis Description
CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.