Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031600_P001 | Maize | plastid | 89.17 | 89.62 |
| TraesCS7D01G259800.1 | Wheat | plastid | 63.22 | 62.28 |
| TraesCS7B01G156400.1 | Wheat | plastid | 62.97 | 62.03 |
| TraesCS7A01G258900.1 | Wheat | plastid | 62.72 | 61.79 |
| TraesCSU01G217700.1 | Wheat | plastid | 62.72 | 61.79 |
| TraesCSU01G218600.1 | Wheat | plastid | 62.72 | 61.79 |
| HORVU7Hr1G053840.1 | Barley | golgi | 55.42 | 61.28 |
| Os08t0529200-00 | Rice | plastid | 62.22 | 59.09 |
| EES04112 | Sorghum | cytosol | 41.31 | 40.1 |
| EES05487 | Sorghum | plastid | 23.68 | 23.04 |
| KXG38242 | Sorghum | plastid | 21.16 | 22.05 |
Protein Annotations
| EnsemblPlants:EES14199 | EnsemblPlantsGene:SORBI_3007G195000 | EntrezGene:8062402 | Gene3D:3.10.580.10 | PANTHER:PTHR13780 | PANTHER:PTHR13780:SF57 |
| ProteinID:EES14199 | ProteinID:EES14199.1 | RefSeq:XP_002444704.1 | SEG:seg | SUPFAM:SSF54631 | UniParc:UPI0001A87DA5 |
| UniProt:C5YI34 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:62728624..62730261
Molecular Weight (calculated)
41189.3 Da
IEP (calculated)
7.048
GRAVY (calculated)
0.155
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHIVFLRTA AADLTAGKPP LRGVPASAPL SAAAAAIPAS QEADVAVWRD GASPLAPAEA TVIGLLSSLD VVAFLASHLG DAAAAMRTPA GDVVAHEPAL
101: VREVEPHTRL IEIVELTKQG ARRVLVSKNI TEACTVVDKK PFAPFYKAVL KITGTPTAAA SAKAVGRPSQ PSTTPSAFGC DRYCCVTRED IIRFLINCLG
201: ALAPTPLQSI SSLGAVNRGY AHVEASSPAI ESSWRVPSEP RAVAVVQTNR DGSHKVLADV SAHRLWRRDY AAAADSMASM SSLNFAAGVD GHGIVAPGED
301: DEADVAAPSP RSSTLGGRKA AFEASLVGQM MMASHGGNAA LRCRSTSSLA AVMAQMLSYR TTHIWVTDGE DDVLVGVVGY MEIFNAVTRG VAPPLPA
101: VREVEPHTRL IEIVELTKQG ARRVLVSKNI TEACTVVDKK PFAPFYKAVL KITGTPTAAA SAKAVGRPSQ PSTTPSAFGC DRYCCVTRED IIRFLINCLG
201: ALAPTPLQSI SSLGAVNRGY AHVEASSPAI ESSWRVPSEP RAVAVVQTNR DGSHKVLADV SAHRLWRRDY AAAADSMASM SSLNFAAGVD GHGIVAPGED
301: DEADVAAPSP RSSTLGGRKA AFEASLVGQM MMASHGGNAA LRCRSTSSLA AVMAQMLSYR TTHIWVTDGE DDVLVGVVGY MEIFNAVTRG VAPPLPA
001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
Arabidopsis Description
CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.