CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042343_P001	Maize	extracellular	91.93	92.38
Os01t0920000-01	Rice	cytosol, plasma membrane	71.88	76.56
TraesCS3B01G463800.1	Wheat	cytosol	73.84	75.88
TraesCS3D01G422700.1	Wheat	cytosol	73.59	75.63
TraesCS3A01G427100.1	Wheat	cytosol	73.35	75.38
HORVU3Hr1G094090.2	Barley	cytosol	72.37	73.82
GSMUA_Achr10P...	Banana	cytosol	55.5	59.89
TraesCS3B01G463400.1	Wheat	plastid	60.64	53.22
Solyc04g056630.2.1	Tomato	cytosol	53.79	52.38
CDY68980	Canola	cytosol	54.52	52.35
GSMUA_Achr7P22870_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	55.01	52.2
PGSC0003DMT400027312	Potato	cytosol, mitochondrion, plastid	53.55	51.9
CDY39289	Canola	cytosol	54.03	51.64
KRH40331	Soybean	cytosol, nucleus	53.3	51.29
VIT_04s0023g00310.t01	Wine grape	cytosol, plastid, vacuole	53.55	51.29
AT1G65320.1	Thale cress	cytosol	52.81	50.82
KRH00904	Soybean	cytosol	52.57	50.59
GSMUA_AchrUn_...	Banana	cytosol	54.03	50.0
Bra004113.1-P	Field mustard	plastid	53.06	50.0
EES14199	Sorghum	plastid	40.1	41.31
EES05487	Sorghum	plastid	23.96	24.02
KXG38242	Sorghum	plastid	19.8	21.26

Protein Annotations

Gene3D:3.10.580.10	MapMan:35.1	UniProt:C5XG98	InterPro:CBS_dom	EnsemblPlants:EES04112	ProteinID:EES04112
ProteinID:EES04112.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009926	GO:GO:0009987	GO:GO:0010252
GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	InterPro:IPR000644	PFAM:PF00571	PFscan:PS51371
PANTHER:PTHR13780	PANTHER:PTHR13780:SF46	EnsemblPlantsGene:SORBI_3003G404100	SUPFAM:SSF54631	UniParc:UPI00081AC997	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:71182266..71186959

Molecular Weight (calculated)

43507.1 Da

IEP (calculated)

8.063

GRAVY (calculated)

0.011

Length

409 amino acids

Sequence
(BLAST)

001: MAAVFFHHVV GDLTVGKPEV AELHDTDTLD DAARAIAASP EGAVPVWRPR AAPYDPPSGA RFIGMISALD IAAFVAAAGV GDRAMRAVVG EVVQPNPALL
101: REIDPGTRLI DALELMRHGV KRFLVRKSGS WKGITKRFSV LFNGKWLKNM ESTSPNAASS SSMPLSPPSG SADKFCCLSR EDVLRFLIGC LGALAPIPLT
201: QISSLGAINP QYSYVEASAP AMEAIQKIPQ DPCAVAVVET APDGTRKILG DISTYKLWKC DYVSAAWALA NLSAGQFVLG ADENGSMPIS VFPEPPISPS
301: SPVEEISPGR SPRAKKFSSR SIGFLSNTQA SQMSAWRTRS AYHRGRSTPL MCKTTSTLAA VMAQMLSHRA THVWVTDAES EDGVLVGVVG YTEIFNAATR
401: STCASPTTS

Best Arabidopsis Sequence Match ( AT1G65320.1 )
(BLAST)

001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS

Arabidopsis Description

CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.