Factsheet for TraesCS3D01G422700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, vacuole
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G463800.1	Wheat	cytosol	98.49	98.49
TraesCS3A01G427100.1	Wheat	cytosol	97.74	97.74
HORVU3Hr1G094090.2	Barley	cytosol	96.98	96.26
Os01t0920000-01	Rice	cytosol, plasma membrane	72.61	75.26
Zm00001d042343_P001	Maize	extracellular	76.88	75.18
EES04112	Sorghum	cytosol	75.63	73.59
GSMUA_Achr10P...	Banana	cytosol	54.77	57.52
GSMUA_Achr7P22870_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	55.78	51.51
KRH00904	Soybean	cytosol	54.77	51.29
Solyc04g056630.2.1	Tomato	cytosol	53.77	50.95
PGSC0003DMT400027312	Potato	cytosol, mitochondrion, plastid	54.02	50.95
KRH40331	Soybean	cytosol, nucleus	53.77	50.35
CDY68980	Canola	cytosol	53.52	50.0
VIT_04s0023g00310.t01	Wine grape	cytosol, plastid, vacuole	53.52	49.88
CDY39289	Canola	cytosol	53.27	49.53
AT1G65320.1	Thale cress	cytosol	52.76	49.41
GSMUA_AchrUn_...	Banana	cytosol	54.52	49.09
Bra004113.1-P	Field mustard	plastid	52.01	47.7
TraesCS7D01G259800.1	Wheat	plastid	44.97	44.42
TraesCS6D01G218300.1	Wheat	plastid	22.61	23.38
TraesCS2D01G599900.1	Wheat	cytosol	21.36	22.25
TraesCS1D01G167600.1	Wheat	plastid	20.35	21.72

Protein Annotations

EnsemblPlants:TraesCS3D01G422700.1	EnsemblPlantsGene:TraesCS3D01G422700	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF46	PFAM:PF00571	PFscan:PS51371	SEG:seg	SUPFAM:SSF54631	TIGR:cd02205
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:535403126..535405790

Molecular Weight (calculated)

42234.6 Da

IEP (calculated)

6.255

GRAVY (calculated)

0.068

Length

398 amino acids

Sequence
(BLAST)

001: MAAVFYHHVV GDLTVGKPEI AELSDADTLD DAARAIAGSP EGAVPVWRAR AAPDDPPSGI RFLGMISAVD IAAFLAGAGA GDRAMRAAVG EVVQPNQDLL
101: REVDPGTRLI DALELMRNGV KRFLVRKNGS WTGITKRFSM LYNGKWMKNS ESGSPSSAGS SSMQLSPFIS CAERFCCLSR EDILRFLIGC LGALAPIPLS
201: PICTLGAINP HYCHVEASAP AMEAIQKIPG DPCGVAVVET TPDGVRKIIG DISAYKLWKC DYVAAAWALA NLSAGQFVIG ADENGSTPIS AFPLPSISSS
301: LSEEAAEPGR SPRLLKKFSS RNIGFLNSQA NQVRSMYRGR SSPLMCRSTS SLAAVMAQML SHRATHVWVT DAEAEEDDVL VGVVGYTDIF AAVTRSSA

Best Arabidopsis Sequence Match ( AT1G65320.1 )
(BLAST)

001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS

Arabidopsis Description

CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.