Factsheet for HORVU3Hr1G094090.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G422700.1	Wheat	cytosol	96.26	96.98
TraesCS3A01G427100.1	Wheat	cytosol	95.26	95.98
TraesCS3B01G463800.1	Wheat	cytosol	95.26	95.98
Os01t0920000-01	Rice	cytosol, plasma membrane	72.07	75.26
Zm00001d042343_P001	Maize	extracellular	75.06	73.96
EES04112	Sorghum	cytosol	73.82	72.37
TraesCS3B01G463400.1	Wheat	plastid	79.55	68.45
GSMUA_Achr10P...	Banana	cytosol	53.62	56.73
GSMUA_Achr7P22870_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	54.61	50.81
PGSC0003DMT400027312	Potato	cytosol, mitochondrion, plastid	53.12	50.47
KRH00904	Soybean	cytosol	53.37	50.35
Solyc04g056630.2.1	Tomato	cytosol	52.62	50.24
VIT_04s0023g00310.t01	Wine grape	cytosol, plastid, vacuole	53.12	49.88
KRH40331	Soybean	cytosol, nucleus	52.62	49.65
CDY68980	Canola	cytosol	52.62	49.53
CDY39289	Canola	cytosol	52.12	48.83
AT1G65320.1	Thale cress	cytosol	51.62	48.71
GSMUA_AchrUn_...	Banana	cytosol	53.12	48.19
Bra004113.1-P	Field mustard	plastid	51.12	47.23
HORVU7Hr1G053840.1	Barley	golgi	39.9	44.57
HORVU2Hr1G118660.1	Barley	cytosol, extracellular, mitochondrion, plastid	12.97	23.11
HORVU6Hr1G060370.2	Barley	plastid	21.2	21.52
HORVU1Hr1G044960.1	Barley	mitochondrion, plastid	20.2	16.77

Protein Annotations

EnsemblPlants:HORVU3Hr1G094090.2	EnsemblPlantsGene:HORVU3Hr1G094090	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF46	PFAM:PF00571	PFscan:PS51371	SEG:seg	SUPFAM:SSF54631	UniParc:UPI000B464A43
UniProt:A0A287MCN5	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:644957350..644960606

Molecular Weight (calculated)

42534.0 Da

IEP (calculated)

6.256

GRAVY (calculated)

0.044

Length

401 amino acids

Sequence
(BLAST)

001: PGPPMAAVFY HHVVGDLTVG KPEIAELSDA DTLDDAARAI AGSPEGAVPV WRARAAPDEP PSGARFLGMI SAVDIAAFLA GAGAGDRAMR AAVGEVVQPN
101: QDLLREVDPG TRLIDALELM RNGVKRFLVR KNGSWTGITK RFSMLYNGKW MKNSESGSPS SAGSSNMQLS PFISCAERFC CLSREDILRF LIGCLGALAP
201: IPLSPICTLG AINPHYCHVE ASAPAMEAIQ KIPGDPCGVA VVETTPDGVR KIIGDISAYK LWKCDYVAAA WALANLSAGQ FVIGADENGS TPISAFPVPS
301: ISSLLSEEAE PGRSPRLLKK FSSRNIGFLN SQANQVRSMY RGRSSPLMCR STSSLAAVMA QMLSHRATHV WVTDAEAEEE DVLVGVVGYT DIFAAVTRNG
401: A

Best Arabidopsis Sequence Match ( AT1G65320.1 )
(BLAST)

001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS

Arabidopsis Description

CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.