Factsheet for GSMUA_AchrUn_randomP06010_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	51.13	59.63
GSMUA_Achr7P22870_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	54.3	55.68
TraesCS3B01G463800.1	Wheat	cytosol	49.77	55.28
TraesCS3D01G422700.1	Wheat	cytosol	49.09	54.52
TraesCS3A01G427100.1	Wheat	cytosol	49.09	54.52
EES04112	Sorghum	cytosol	50.0	54.03
Zm00001d042343_P001	Maize	extracellular	49.32	53.56
HORVU3Hr1G094090.2	Barley	cytosol	48.19	53.12
Os01t0920000-01	Rice	cytosol, plasma membrane	45.93	52.86
VIT_04s0023g00310.t01	Wine grape	cytosol, plastid, vacuole	46.83	48.48
PGSC0003DMT400027312	Potato	cytosol, mitochondrion, plastid	45.48	47.63
CDY68980	Canola	cytosol	45.48	47.18
Solyc04g056630.2.1	Tomato	cytosol	44.57	46.9
CDY39289	Canola	cytosol	45.25	46.73
AT1G65320.1	Thale cress	cytosol	44.57	46.35
KRH40331	Soybean	cytosol, nucleus	44.57	46.35
Bra004113.1-P	Field mustard	plastid	44.34	45.16
KRH00904	Soybean	cytosol	42.99	44.71
TraesCS3B01G463400.1	Wheat	plastid	43.21	40.99
GSMUA_AchrUn_...	Banana	cytosol, plastid	22.85	25.9
GSMUA_Achr3P14310_001	Banana	cytosol	21.95	25.8
GSMUA_Achr11P...	Banana	cytosol	21.04	24.03
GSMUA_Achr1P17630_001	Banana	cytosol	20.81	23.59
GSMUA_Achr2P18550_001	Banana	cytosol	19.46	22.05

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP06010_001	EnsemblPlants:GSMUA_AchrUn_randomT06010_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG06010_001	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644
PANTHER:PTHR13780	PANTHER:PTHR13780:SF46	PFAM:PF00571	PFscan:PS51371	SEG:seg	SMART:SM00116
SUPFAM:SSF54631	UniParc:UPI000296A3B1	UniProt:M0U6R2	MapMan:35.1	:	:

Description

CBS domain-containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG06010_001]

Coordinates

chrchrUn_random:-:25585777..25588309

Molecular Weight (calculated)

47424.8 Da

IEP (calculated)

5.930

GRAVY (calculated)

0.124

Length

442 amino acids

Sequence
(BLAST)

001: MALVFLHRVI GDLTLGKPDL IEFSEVETLE AAARAIAGSS EGAIPVWHNR IPAAGAAPSS EERFVGMLNS LDVVAFLARA GGDRDRAMRT PVSEVVTPNP
101: NLLREVDPCV SFYCGASDFK AQALIYSSKQ QTFCGASDFK AQALIYSSNR LFRELLLVLC RSNSSFGFTR LIDALELMKL GVRCLLVRRS ATSAATSSSP
201: PSSSSLPQNN FCCLSREDVV RFLIGCLGAL APIPLSSITS LGAVDPHYSY VEALSPALEA IGKIPHGPCA IAVVETTSDG SHKILGDISA YELWKCDYVT
301: TAWAMANLSA GQFAIGTDEN GCSSPVDPPD QPIDLPVEVV TVGASPRLTK FSSRSIGFFD NQLKQVQTGR PRSMYKGRSK LLTCKHTSSL AAVMAQMLSY
401: RATHVWVIDS ESEDDILVGV VSYTDILDAV TRYASSVVPP TP

Best Arabidopsis Sequence Match ( AT1G65320.1 )
(BLAST)

001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS

Arabidopsis Description

CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.