Factsheet for TraesCS3B01G463400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G463800.1	Wheat	cytosol	70.39	82.41
HORVU3Hr1G094090.2	Barley	cytosol	68.45	79.55
Os01t0920000-01	Rice	cytosol, plasma membrane	54.29	65.89
Zm00001d042343_P001	Maize	extracellular	54.29	62.16
EES04112	Sorghum	cytosol	53.22	60.64
GSMUA_Achr10P...	Banana	cytosol	40.99	50.4
GSMUA_Achr7P22870_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	42.7	46.17
KRH00904	Soybean	cytosol	42.06	46.12
Solyc04g056630.2.1	Tomato	cytosol	41.42	45.95
VIT_04s0023g00310.t01	Wine grape	cytosol, plastid, vacuole	42.06	45.9
KRH40331	Soybean	cytosol, nucleus	41.63	45.65
PGSC0003DMT400027312	Potato	cytosol, mitochondrion, plastid	41.2	45.5
CDY68980	Canola	cytosol	40.77	44.6
AT1G65320.1	Thale cress	cytosol	40.34	44.24
CDY39289	Canola	cytosol	40.34	43.93
Bra004113.1-P	Field mustard	plastid	40.77	43.78
GSMUA_AchrUn_...	Banana	cytosol	40.99	43.21
TraesCS7B01G156400.1	Wheat	plastid	34.33	39.7
TraesCS6B01G264200.1	Wheat	plastid	17.38	20.88
TraesCS1B01G187200.1	Wheat	plastid	16.09	20.11

Protein Annotations

EnsemblPlants:TraesCS3B01G463400.1	EnsemblPlantsGene:TraesCS3B01G463400	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF46	PFAM:PF00571	PFscan:PS51371	SEG:seg	SUPFAM:SSF54631	TIGR:cd02205
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:706189414..706192262

Molecular Weight (calculated)

48865.3 Da

IEP (calculated)

8.796

GRAVY (calculated)

-0.081

Length

466 amino acids

Sequence
(BLAST)

001: MLDFSVCSPC SGLSLPPTWP ATPAPAPPVT TSPSTPPLPP SSCPGAASAW GPPGFSCTCS SSTRSYNPAP PAARPWPPSS TTTSSATSPS ASPRSPSSAT
101: PTRSTTRRGP SPAARRAPCP SGARGPPSGA RFLGMISAVD IAAFLAGAGD RAMRAAVGEV VQPNQDLLRE VDPGTRLIDA LELMRNGVKR FLVRKNGSWT
201: GITKRFSMLY NRKWMKNSES GSPSSAGSSS MQLSPFISCA ERFCCLSRED ILRFLIGCLG ALAPIPLSPI CTLGAINPHY CHVEASAPAM EAIQKIPGDP
301: CGVAVVETMP DGVRKIIGDI SAYKLWKCDY VAAAWALANL SAGQFVIGAD ENGSTPISAF PLPSISSSLS EEAAEPGRSP RLLKKFSSRN IGFLNSQANQ
401: VRSMYRGRSS PLMCRSTSSL AAVMAQMLSH RATHVWVTDA EAEEDDVLVG VVGYTDIFAA VTRSSA

Best Arabidopsis Sequence Match ( AT1G65320.1 )
(BLAST)

001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS

Arabidopsis Description

CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.