Factsheet for GSMUA_Achr10P29030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P22870_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	78.36	68.91
Os01t0920000-01	Rice	cytosol, plasma membrane	61.21	60.42
Solyc04g056630.2.1	Tomato	cytosol	62.53	56.43
VIT_04s0023g00310.t01	Wine grape	cytosol, plastid, vacuole	63.32	56.21
EES04112	Sorghum	cytosol	59.89	55.5
Zm00001d042343_P001	Maize	extracellular	58.84	54.79
TraesCS3D01G422700.1	Wheat	cytosol	57.52	54.77
TraesCS3B01G463800.1	Wheat	cytosol	57.26	54.52
TraesCS3A01G427100.1	Wheat	cytosol	56.99	54.27
PGSC0003DMT400027312	Potato	cytosol, mitochondrion, plastid	60.42	54.27
CDY68980	Canola	cytosol	60.69	53.99
KRH00904	Soybean	cytosol	60.42	53.88
CDY39289	Canola	cytosol	60.69	53.74
KRH40331	Soybean	cytosol, nucleus	60.16	53.65
HORVU3Hr1G094090.2	Barley	cytosol	56.73	53.62
AT1G65320.1	Thale cress	cytosol	59.89	53.41
Bra004113.1-P	Field mustard	plastid	58.58	51.15
GSMUA_AchrUn_...	Banana	cytosol	59.63	51.13
TraesCS3B01G463400.1	Wheat	plastid	50.4	40.99
GSMUA_Achr3P14310_001	Banana	cytosol	24.54	24.73
GSMUA_Achr11P...	Banana	cytosol	24.8	24.29
GSMUA_AchrUn_...	Banana	cytosol, plastid	24.54	23.85
GSMUA_Achr2P18550_001	Banana	cytosol	23.75	23.08
GSMUA_Achr1P17630_001	Banana	cytosol	22.69	22.05

Protein Annotations

EnsemblPlants:GSMUA_Achr10P29030_001	EnsemblPlants:GSMUA_Achr10T29030_001	EnsemblPlantsGene:GSMUA_Achr10G29030_001	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644
PANTHER:PTHR13780	PANTHER:PTHR13780:SF46	PFAM:PF00571	PFscan:PS51371	SEG:seg	SMART:SM00116
SUPFAM:SSF54631	UniParc:UPI00029621B7	UniProt:M0RMC7	MapMan:35.1	:	:

Description

CBS domain-containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G29030_001]

Coordinates

chr10:-:31659429..31661963

Molecular Weight (calculated)

40815.7 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.041

Length

379 amino acids

Sequence
(BLAST)

001: MARVFLHHVV GDLTLGKPEL VEFSEAETVE AAPAPPPSAE RFIGMLTSLD VVAFLARAGA DQERAMRTPV SELVAPNPSL LKEVDPGTRL IDALEMMKQG
101: VRHLLVRKSI VWKGFSKRFS ILYNGRWLKN TQSSSLGGES NSDRPSTSAL PDNKFCCLSR EDVVRFLIGC LGALAPLPLS SISSVGAIGS NYAYIEASSP
201: ALEAIYKIPH DPCAIAVVET NSEGSHKIIG DISAYKLWKC DYLAAAWAMA NLSAGQFVVG ADDYGTTPVS VPELPIDSSA GDTGAGDSSR PRKFSSRSIG
301: FFSNQANQMS IGRLRSMYRG RSAPWTCKHT SSLAAVMAQM LSHRATHVWV TDADLDDDTL VGIISYTDIL NAVTKHPTP

Best Arabidopsis Sequence Match ( AT1G65320.1 )
(BLAST)

001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS

Arabidopsis Description

CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.