Factsheet for TraesCS3A01G427100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G422700.1	Wheat	cytosol	97.74	97.74
TraesCS3B01G463800.1	Wheat	cytosol	96.73	96.73
HORVU3Hr1G094090.2	Barley	cytosol	95.98	95.26
Os01t0920000-01	Rice	cytosol, plasma membrane	72.86	75.52
Zm00001d042343_P001	Maize	extracellular	76.38	74.69
EES04112	Sorghum	cytosol	75.38	73.35
GSMUA_Achr10P...	Banana	cytosol	54.27	56.99
GSMUA_Achr7P22870_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	55.28	51.04
KRH00904	Soybean	cytosol	54.02	50.59
Solyc04g056630.2.1	Tomato	cytosol	53.02	50.24
PGSC0003DMT400027312	Potato	cytosol, mitochondrion, plastid	53.02	50.0
KRH40331	Soybean	cytosol, nucleus	53.02	49.65
CDY68980	Canola	cytosol	53.02	49.53
VIT_04s0023g00310.t01	Wine grape	cytosol, plastid, vacuole	53.02	49.41
GSMUA_AchrUn_...	Banana	cytosol	54.52	49.09
CDY39289	Canola	cytosol	52.76	49.07
AT1G65320.1	Thale cress	cytosol	52.26	48.94
Bra004113.1-P	Field mustard	plastid	51.51	47.23
TraesCS7A01G258900.1	Wheat	plastid	45.48	44.91
TraesCS6A01G235600.1	Wheat	plastid	23.37	23.79
TraesCS2A01G586700.1	Wheat	cytosol, peroxisome, plastid	21.86	22.89
TraesCS1A01G170000.1	Wheat	plastid	20.85	22.25

Protein Annotations

EnsemblPlants:TraesCS3A01G427100.1	EnsemblPlantsGene:TraesCS3A01G427100	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF46	PFAM:PF00571	PFscan:PS51371	SEG:seg	SUPFAM:SSF54631	TIGR:cd02205
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:670548540..670551604

Molecular Weight (calculated)

42179.4 Da

IEP (calculated)

6.397

GRAVY (calculated)

0.053

Length

398 amino acids

Sequence
(BLAST)

001: MAAVFYHHVV GDLTVGKPEI AELSDADTLD DAARAIAGSP EGAVPVWRAR AAPDDPPSGA RFLGMISAVD IAAFLAAAGA GDRAMRAAVG EAVQPNQDLL
101: REVDPGTRLI DALELMRHGV KRFLVRKNGS WTGITKRFSM LYNGKWMKNS ESGSPSSAGS SSMQLSPFIS CTERFCCLSR EDILRFLIGC LGALAPIPLS
201: PICTLGAINP HYCHVEASAP AMEAIQKIPG DPCGVAVVET TPDGVRKIIG DISAYKLWKC DYVAAAWALA NLSAGQFAIG ADENGSTPIS AFAVPSISSS
301: LSEESAEPGR SPRLLKKFSS RNIGFLNSQA NQVRSMYRGR SSPLMCRSTS SLAAVMAQML SHRATHVWVT DAEAEEDDVL VGVVGYTDIF AAVTRSSA

Best Arabidopsis Sequence Match ( AT1G65320.1 )
(BLAST)

001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS

Arabidopsis Description

CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.