Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G187200.1 | Wheat | plastid | 99.46 | 99.46 |
| TraesCS1D01G167600.1 | Wheat | plastid | 98.93 | 98.93 |
| Zm00001d032560_P001 | Maize | plastid | 79.62 | 79.2 |
| KXG38242 | Sorghum | plastid | 80.16 | 78.48 |
| Zm00001d013933_P001 | Maize | cytosol, plastid | 78.02 | 77.81 |
| Os10t0499400-01 | Rice | cytosol, endoplasmic reticulum | 57.37 | 75.89 |
| HORVU1Hr1G044960.1 | Barley | mitochondrion, plastid | 96.25 | 74.33 |
| GSMUA_Achr2P18550_001 | Banana | cytosol | 58.45 | 55.9 |
| GSMUA_Achr11P... | Banana | cytosol | 55.5 | 53.49 |
| TraesCS6A01G235600.1 | Wheat | plastid | 46.11 | 43.99 |
| VIT_00s0587g00030.t01 | Wine grape | cytosol | 43.7 | 42.45 |
| VIT_19s0014g03090.t01 | Wine grape | extracellular, plastid, vacuole | 44.77 | 42.39 |
| KRH27215 | Soybean | cytosol | 43.43 | 41.54 |
| KRH22128 | Soybean | plastid | 43.16 | 41.39 |
| PGSC0003DMT400064370 | Potato | cytosol, extracellular, plastid | 43.7 | 41.16 |
| Solyc10g006920.2.1 | Tomato | cytosol, peroxisome, plastid | 43.7 | 41.16 |
| TraesCS2A01G586700.1 | Wheat | cytosol, peroxisome, plastid | 41.02 | 40.26 |
| PGSC0003DMT400057642 | Potato | cytosol | 42.36 | 39.21 |
| Solyc02g078480.2.1 | Tomato | cytosol | 42.36 | 39.01 |
| CDX89247 | Canola | cytosol, extracellular, plastid, vacuole | 40.21 | 38.76 |
| Bra026347.1-P | Field mustard | cytosol, extracellular, plastid, vacuole | 40.21 | 38.76 |
| PGSC0003DMT400058761 | Potato | mitochondrion | 40.75 | 38.68 |
| CDY29313 | Canola | cytosol, extracellular, plastid, vacuole | 39.95 | 38.6 |
| PGSC0003DMT400033347 | Potato | cytosol | 40.75 | 38.1 |
| Solyc10g009010.2.1 | Tomato | cytosol | 39.41 | 37.4 |
| AT4G27460.1 | Thale cress | plastid | 39.14 | 37.34 |
| CDY66674 | Canola | cytosol | 41.02 | 37.32 |
| AT5G53750.1 | Thale cress | cytosol | 40.75 | 37.25 |
| CDY53481 | Canola | cytosol | 40.21 | 37.13 |
| Solyc03g006470.2.1 | Tomato | cytosol | 39.41 | 36.75 |
| CDY28817 | Canola | cytosol | 36.73 | 35.68 |
| KRH10848 | Soybean | cytosol | 36.19 | 35.43 |
| CDX96240 | Canola | cytosol | 38.07 | 35.41 |
| KRH21471 | Soybean | cytosol | 37.53 | 35.18 |
| Bra022672.1-P | Field mustard | cytosol | 32.98 | 33.06 |
| Bra029056.1-P | Field mustard | cytosol | 37.8 | 29.75 |
| TraesCS7A01G258900.1 | Wheat | plastid | 24.66 | 22.83 |
| TraesCS3A01G427100.1 | Wheat | cytosol | 22.25 | 20.85 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G170000.1 | EnsemblPlantsGene:TraesCS1A01G170000 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 | PANTHER:PTHR13780:SF39 |
| PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SMART:SM00116 | SUPFAM:SSF54631 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1A:-:303728090..303729971
Molecular Weight (calculated)
38886.8 Da
IEP (calculated)
5.238
GRAVY (calculated)
0.303
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSLLANDV SDLCIGKPAV RSLPLSAAAG DLAATVRKGP RAAAAACIAV GPARGAVVGR AGLADVLCLL CSSPDALARP AAALDRPVSA LLPKDGAGEV
101: RRVDPRSSVL EALDEILSGA QVLAVPLRSG GRKKQLGGVA GVTGDFCWLT QEDLVRYFLN SISLFYHVAA RSVSSLGLVR PDFLSVRPDE AALSAVPLIR
201: RAIAAETAVA VVSADGHLVG EISTAHLAAC DETAAAAIAT LSAADLMAYI DYFGSPPEHI LCAIKTGLKA KGLDAMLELM EDETMTSFSL SSSSSDDDTG
301: RPHLRRPSSG SFGRRSTEEP VVCSPASSLV AVMVQALAHR VSYLWVLDEE DDCRLAGIVT FADILRVFRE QLQ
101: RRVDPRSSVL EALDEILSGA QVLAVPLRSG GRKKQLGGVA GVTGDFCWLT QEDLVRYFLN SISLFYHVAA RSVSSLGLVR PDFLSVRPDE AALSAVPLIR
201: RAIAAETAVA VVSADGHLVG EISTAHLAAC DETAAAAIAT LSAADLMAYI DYFGSPPEHI LCAIKTGLKA KGLDAMLELM EDETMTSFSL SSSSSDDDTG
301: RPHLRRPSSG SFGRRSTEEP VVCSPASSLV AVMVQALAHR VSYLWVLDEE DDCRLAGIVT FADILRVFRE QLQ
001: MALSLLSYNV SDLCLGKPPL RCLSSSSSSV SDAIAALKSS EDTFLSVWNC NHDDDNNTEC ECLGKISMAD VICHLSKDHD HSLCALNSSV SVLLPKTRSI
101: VLHVQPSCSL IEAIDLIIKG AQNLIVPIHT KPYTKKKQHN DNVSVTTTTH SNGQRFCWIT QEDIIQFLLG FIAAFSPLPA MSLSDLGVIN STHTVVAVDY
201: HSSASAVVSA VSNALAVQTS VAVVDGEGDD PFTSLIGEIS PMTLTCCDET AAAAVATLSA GDLMAYIDGA NPPESLVQIV RNRLEDKGLI GLMSLFDSLS
301: SYSTSSGYSS EEEAPVRTTS YGRSMSSSAR MARKSEAIVC NPKSSLMAVM IQAVAHRVNY AWVVEKDGCF VGMVTFVDIL KVFRKFLEND M
101: VLHVQPSCSL IEAIDLIIKG AQNLIVPIHT KPYTKKKQHN DNVSVTTTTH SNGQRFCWIT QEDIIQFLLG FIAAFSPLPA MSLSDLGVIN STHTVVAVDY
201: HSSASAVVSA VSNALAVQTS VAVVDGEGDD PFTSLIGEIS PMTLTCCDET AAAAVATLSA GDLMAYIDGA NPPESLVQIV RNRLEDKGLI GLMSLFDSLS
301: SYSTSSGYSS EEEAPVRTTS YGRSMSSSAR MARKSEAIVC NPKSSLMAVM IQAVAHRVNY AWVVEKDGCF VGMVTFVDIL KVFRKFLEND M
Arabidopsis Description
CBSX5CBSX5 [Source:UniProtKB/TrEMBL;Acc:A0A178V3C0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.