CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
extracellular 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53481	Canola	cytosol	86.34	87.62
AT5G53750.1	Thale cress	cytosol	79.27	79.66
CDY28817	Canola	cytosol	73.66	78.65
CDX96240	Canola	cytosol	76.1	77.81
Bra029056.1-P	Field mustard	cytosol	83.41	72.15
CDX89247	Canola	cytosol, extracellular, plastid, vacuole	60.24	63.82
CDY29313	Canola	cytosol, extracellular, plastid, vacuole	60.0	63.73
KRH27215	Soybean	cytosol	49.51	52.05
KRH22128	Soybean	plastid	49.27	51.93
VIT_19s0014g03090.t01	Wine grape	extracellular, plastid, vacuole	48.05	50.0
PGSC0003DMT400064370	Potato	cytosol, extracellular, plastid	47.32	48.99
Solyc10g006920.2.1	Tomato	cytosol, peroxisome, plastid	45.85	47.47
GSMUA_AchrUn_...	Banana	cytosol, plastid	43.41	45.64
GSMUA_Achr3P14310_001	Banana	cytosol	40.24	43.88
GSMUA_Achr1P17630_001	Banana	cytosol	40.49	42.56
Os10t0499400-01	Rice	cytosol, endoplasmic reticulum	29.27	42.55
GSMUA_Achr11P...	Banana	cytosol	40.0	42.38
GSMUA_Achr2P18550_001	Banana	cytosol	40.24	42.31
Zm00001d013933_P001	Maize	cytosol, plastid	38.05	41.71
TraesCS1B01G187200.1	Wheat	plastid	37.56	41.29
TraesCS1A01G170000.1	Wheat	plastid	37.32	41.02
KXG38242	Sorghum	plastid	38.05	40.94
Zm00001d032560_P001	Maize	plastid	37.32	40.8
TraesCS1D01G167600.1	Wheat	plastid	37.07	40.75
TraesCS6D01G218300.1	Wheat	plastid	35.37	37.66
TraesCS6B01G264200.1	Wheat	plastid	34.88	36.86
HORVU6Hr1G060370.2	Barley	plastid	35.12	36.46
TraesCS6A01G235600.1	Wheat	plastid	34.39	36.06
HORVU2Hr1G118660.1	Barley	cytosol, extracellular, mitochondrion, plastid	19.76	36.0
EES05487	Sorghum	plastid	35.37	35.54
Zm00001d017375_P001	Maize	plastid	35.85	35.51
TraesCS2A01G586700.1	Wheat	cytosol, peroxisome, plastid	32.44	35.0
TraesCSU01G021400.1	Wheat	cytosol	31.95	34.29
TraesCS2D01G599900.1	Wheat	cytosol	31.71	34.03
HORVU1Hr1G044960.1	Barley	mitochondrion, plastid	36.59	31.06
Os04t0679600-01	Rice	nucleus	22.68	23.02
CDY68980	Canola	cytosol	22.93	22.07
CDY39289	Canola	cytosol	22.93	21.96

Protein Annotations

EnsemblPlants:CDY66674	EnsemblPlantsGene:GSBRNA2T00055553001	Gene3D:3.10.580.10	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF55	PFAM:PF00571	PFscan:PS51371	ProteinID:CDY66674	ProteinID:CDY66674.1	SEG:seg
SUPFAM:SSF54631	UniParc:UPI0004EE766D	UniProt:A0A078JIX4	MapMan:35.1	:	:

Description

BnaCnng51910DBnaCnng51910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIX4]

Coordinates

chrLK035402:-:11863..13156

Molecular Weight (calculated)

43782.3 Da

IEP (calculated)

4.767

GRAVY (calculated)

0.178

Length

410 amino acids

Sequence
(BLAST)

001: MALTLLSHEV SDLCIGKPPL RCLSAVTATV ADAIAALKSS DEPFLSVWSC NHDETNDDNN KCECECECEC VGKICMADVI CYLTKHDSKA LSLSSVFEAS
101: VSVLLPKSRS IVVHVQSSCK LIEAIDLITG GAQDLIVPIQ TKPITKRRQP RNAVVSLTTA TTTTTTHKNN RQFCWITQED IIRFLLDSIS VFSPLPSLSI
201: SDLGVINSTH AILSVDYYSS ASSAVTAISR AISDNISVAV VDGECDGEED PRAVLIGEIS PMTLACCDES AAAAVATLSA GDLMTYIDGS GPPESLVRVV
301: RNRLEEKGLV GLISLVDSLS GSSGSSSSDE ESPAGRTKSY GRSVSSAARM ARKSVAIVCN RRSSLMAVMI QAIAHRVSYV WVVDEDGCLV GMVTFVDILK
401: LFRGFLDDQN

Best Arabidopsis Sequence Match ( AT5G53750.1 )
(BLAST)

001: MALTLLSHEL SDLCIGKPPL RCLSVATATV ADAIAALKSS DEPFLTVWSC NHDEKTDDND KCECLGKICM ADVICYLSKF DNNVLSLSSA FDASVSVLLP
101: KSRALVVHVQ SSCSLIEAID LIIKGAQNLI VPIHTKSITK RRQQQKLLKR NVVVSLTNAT STTHKNSREF CWITQEDIIR FLLDSISVFS PLPSLSISDL
201: GVINSTHTIL AVDYYSSAAS AVSAISRAIL DNVSVAVVGK GCDQEDPCMV LIGEISPMTL ACCDETAVAA VATLSAGDLM SYIDGSGPPE SLVGVVRNRL
301: EDKGMVGLIS LIDSLSLSSG SSSDEESPAG KTRMTSSYGR SVSSAARMAR KSVAIVCNRK SSLMAVMIQA IAHRVSYVWV IDEDGCLIGM VTFVDILKLF
401: REFLDDEN

Arabidopsis Description

CBS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JXB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.