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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr6P08260_001
GSMUA_Achr6P16290_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G27460.1 GSMUA_Achr6P08260_001 AT5G22310.1 21798944
AT4G27460.1 GSMUA_Achr6P16290_001 AT5G22310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P18550_001 Banana cytosol 72.09 71.54
TraesCS1B01G187200.1 Wheat plastid 53.75 55.76
TraesCS1D01G167600.1 Wheat plastid 53.49 55.5
TraesCS1A01G170000.1 Wheat plastid 53.49 55.5
Zm00001d032560_P001 Maize plastid 52.71 54.4
Zm00001d013933_P001 Maize cytosol, plastid 52.45 54.28
Os10t0499400-01 Rice cytosol, endoplasmic reticulum 38.5 52.84
KXG38242 Sorghum plastid 51.94 52.76
GSMUA_AchrUn_... Banana cytosol, plastid 52.71 52.31
GSMUA_Achr3P14310_001 Banana cytosol 50.13 51.6
GSMUA_Achr1P17630_001 Banana cytosol 50.65 50.26
KRH27215 Soybean cytosol 45.48 45.13
VIT_00s0587g00030.t01 Wine grape cytosol 44.7 45.05
KRH22128 Soybean plastid 44.44 44.22
Solyc10g006920.2.1 Tomato cytosol, peroxisome, plastid 44.96 43.94
PGSC0003DMT400064370 Potato cytosol, extracellular, plastid 44.96 43.94
VIT_19s0014g03090.t01 Wine grape extracellular, plastid, vacuole 44.7 43.91
PGSC0003DMT400057642 Potato cytosol 44.19 42.43
Solyc02g078480.2.1 Tomato cytosol 44.19 42.22
HORVU1Hr1G044960.1 Barley mitochondrion, plastid 52.45 42.03
TraesCS6D01G218300.1 Wheat plastid 41.6 41.82
EES05487 Sorghum plastid 43.93 41.67
PGSC0003DMT400058761 Potato mitochondrion 41.86 41.22
Solyc10g009010.2.1 Tomato cytosol 41.86 41.22
CDY29313 Canola cytosol, extracellular, plastid, vacuole 40.83 40.93
KRH10848 Soybean cytosol 40.05 40.68
Bra026347.1-P Field mustard cytosol, extracellular, plastid, vacuole 40.57 40.57
CDX89247 Canola cytosol, extracellular, plastid, vacuole 40.57 40.57
TraesCS6B01G264200.1 Wheat plastid 40.57 40.46
TraesCS6A01G235600.1 Wheat plastid 40.83 40.41
Zm00001d017375_P001 Maize plastid 43.15 40.34
AT4G27460.1 Thale cress plastid 40.57 40.15
CDY53481 Canola cytosol 41.86 40.1
CDY66674 Canola cytosol 42.38 40.0
HORVU6Hr1G060370.2 Barley plastid 40.83 40.0
Solyc03g006470.2.1 Tomato cytosol 41.09 39.75
KRH21471 Soybean cytosol 40.83 39.7
PGSC0003DMT400033347 Potato cytosol 40.57 39.35
AT5G53750.1 Thale cress cytosol 40.83 38.73
CDY28817 Canola cytosol 37.98 38.28
CDX96240 Canola cytosol 39.02 37.66
Bra022672.1-P Field mustard cytosol 33.85 35.22
Bra029056.1-P Field mustard cytosol 40.57 33.12
GSMUA_Achr10P... Banana cytosol 24.29 24.8
GSMUA_Achr7P22870_001 Banana endoplasmic reticulum, extracellular, plasma membrane 24.03 21.58
GSMUA_AchrUn_... Banana cytosol 24.03 21.04
Protein Annotations
EnsemblPlants:GSMUA_Achr11P21130_001EnsemblPlants:GSMUA_Achr11T21130_001EnsemblPlantsGene:GSMUA_Achr11G21130_001InterPro:CBS_domInterPro:IPR000644PANTHER:PTHR13780
PANTHER:PTHR13780:SF55PFAM:PF00571PFscan:PS51371SEG:segSUPFAM:SSF54631UniParc:UPI000295BF78
UniProt:M0RU43MapMan:35.1::::
Description
cystathionin beta synthase protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G21130_001]
Coordinates
chr11:+:21882516..21883927
Molecular Weight (calculated)
41123.6 Da
IEP (calculated)
4.640
GRAVY (calculated)
0.221
Length
387 amino acids
Sequence
(BLAST)
001: MAVSLVLNEV SDLCIGKPPL ISLPLSAATV SDALLALKRG GEPHLAVLDP DRAPPGKKAV AVAGKICVAD ILCFLCSDDN LASPAAALER PVTALLPKGT
101: GLVRLVEPQF SVLEALDLIV DGAQNLVIPI RSLGRKKLDQ GGDGVATAAK FCWLTHEDFV RYFLNSIALF CPIPTLSIDD LGLVQSADAL TIRHDEPGLS
201: LLPLVRRALT EQAAVAVVTD DGQLLGDISP CALSAGYNTV AVAAGIATLK AGDLMTFIDH YGSPPESLVR AIKAGLKEKG LQEMLHLMED ELSSFSNSSS
301: ASSSDDDSSE EEKRLRRPSK SFSSTGRRSS EPEVCHPGSS LVAVMVQALV HRVSYLWVVD EEDYGLIGIV TFADMLCVFR EQLQPSL
Best Arabidopsis Sequence Match ( AT5G53750.1 )
(BLAST)
001: MALTLLSHEL SDLCIGKPPL RCLSVATATV ADAIAALKSS DEPFLTVWSC NHDEKTDDND KCECLGKICM ADVICYLSKF DNNVLSLSSA FDASVSVLLP
101: KSRALVVHVQ SSCSLIEAID LIIKGAQNLI VPIHTKSITK RRQQQKLLKR NVVVSLTNAT STTHKNSREF CWITQEDIIR FLLDSISVFS PLPSLSISDL
201: GVINSTHTIL AVDYYSSAAS AVSAISRAIL DNVSVAVVGK GCDQEDPCMV LIGEISPMTL ACCDETAVAA VATLSAGDLM SYIDGSGPPE SLVGVVRNRL
301: EDKGMVGLIS LIDSLSLSSG SSSDEESPAG KTRMTSSYGR SVSSAARMAR KSVAIVCNRK SSLMAVMIQA IAHRVSYVWV IDEDGCLIGM VTFVDILKLF
401: REFLDDEN
Arabidopsis Description
CBS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JXB6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.