Factsheet for Solyc10g009010.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058761	Potato	mitochondrion	81.93	81.93
Solyc02g078480.2.1	Tomato	cytosol	64.38	62.47
Solyc03g006470.2.1	Tomato	cytosol	59.29	58.25
VIT_00s0587g00030.t01	Wine grape	cytosol	52.93	54.17
KRH21471	Soybean	cytosol	48.09	47.49
Solyc10g006920.2.1	Tomato	cytosol, peroxisome, plastid	46.56	46.21
KRH10848	Soybean	cytosol	44.78	46.19
GSMUA_AchrUn_...	Banana	cytosol, plastid	43.0	43.33
GSMUA_Achr2P18550_001	Banana	cytosol	42.49	42.82
GSMUA_Achr11P...	Banana	cytosol	41.22	41.86
Os10t0499400-01	Rice	cytosol, endoplasmic reticulum	29.77	41.49
GSMUA_Achr1P17630_001	Banana	cytosol	40.46	40.77
GSMUA_Achr3P14310_001	Banana	cytosol	38.17	39.89
TraesCS1D01G167600.1	Wheat	plastid	37.4	39.41
TraesCS1A01G170000.1	Wheat	plastid	37.4	39.41
Zm00001d032560_P001	Maize	plastid	37.4	39.2
TraesCS1B01G187200.1	Wheat	plastid	37.15	39.14
Zm00001d013933_P001	Maize	cytosol, plastid	37.15	39.04
KXG38242	Sorghum	plastid	37.4	38.58
TraesCS6D01G218300.1	Wheat	plastid	33.59	34.29
TraesCS6B01G264200.1	Wheat	plastid	33.33	33.76
TraesCS6A01G235600.1	Wheat	plastid	32.57	32.74
HORVU6Hr1G060370.2	Barley	plastid	32.82	32.66
TraesCS2A01G586700.1	Wheat	cytosol, peroxisome, plastid	31.55	32.63
EES05487	Sorghum	plastid	33.59	32.35
TraesCS2D01G599900.1	Wheat	cytosol	31.3	32.2
TraesCSU01G021400.1	Wheat	cytosol	31.04	31.94
Zm00001d017375_P001	Maize	plastid	33.33	31.64
HORVU2Hr1G118660.1	Barley	cytosol, extracellular, mitochondrion, plastid	18.07	31.56
HORVU1Hr1G044960.1	Barley	mitochondrion, plastid	36.64	29.81
Solyc04g056630.2.1	Tomato	cytosol	25.95	24.29
Os04t0679600-01	Rice	nucleus	22.39	21.78

Protein Annotations

EnsemblPlants:Solyc10g009010.2.1	EnsemblPlantsGene:Solyc10g009010.2	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780	PANTHER:PTHR13780:SF55
PFAM:PF00571	PFscan:PS51371	SEG:seg	SUPFAM:SSF54631	UniParc:UPI000276BBA9	UniProt:K4CY77
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:3040315..3046302

Molecular Weight (calculated)

42717.3 Da

IEP (calculated)

5.099

GRAVY (calculated)

0.101

Length

393 amino acids

Sequence
(BLAST)

001: MAFPTFLNRN VSDLCVGKPT LKPLSAAATV SEALALLNKS NEPHVSVWSC DHSKNVLEGE CECVGKICMF DVICFLCKNE NSENPSKALE TSVSQILPKG
101: NLIVRHLAPN SSLLQAIDYI LEGTQNLVIP IQDYIGGKPR KTQSKSSSLR CKHRNGVEYC WLTQEDVVRF LLNFIGVFSP ITTSSIESLN VIDCNVMTIC
201: YHEPAMSALD SLTLAHVEQT SVAVVDDLNR LIGEISPSTL SYCDETAAAA VMTLSASDLL AYIDCGGPPD DLVDLVKVIL QEKKLSALLE LMDEELSLST
301: SSSSCSASLS CSSDDELGVC RNNGSGRYSS ARRAEAITCY PNSSLVAVMI QALAHRTSSV WVMHEDNTLI GYVTFKGILK VFRSLANARM ITR

Best Arabidopsis Sequence Match ( AT5G53750.1 )
(BLAST)

001: MALTLLSHEL SDLCIGKPPL RCLSVATATV ADAIAALKSS DEPFLTVWSC NHDEKTDDND KCECLGKICM ADVICYLSKF DNNVLSLSSA FDASVSVLLP
101: KSRALVVHVQ SSCSLIEAID LIIKGAQNLI VPIHTKSITK RRQQQKLLKR NVVVSLTNAT STTHKNSREF CWITQEDIIR FLLDSISVFS PLPSLSISDL
201: GVINSTHTIL AVDYYSSAAS AVSAISRAIL DNVSVAVVGK GCDQEDPCMV LIGEISPMTL ACCDETAVAA VATLSAGDLM SYIDGSGPPE SLVGVVRNRL
301: EDKGMVGLIS LIDSLSLSSG SSSDEESPAG KTRMTSSYGR SVSSAARMAR KSVAIVCNRK SSLMAVMIQA IAHRVSYVWV IDEDGCLIGM VTFVDILKLF
401: REFLDDEN

Arabidopsis Description

CBS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JXB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.