CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21471	Soybean	cytosol	88.45	84.67
VIT_00s0587g00030.t01	Wine grape	cytosol	53.81	53.39
KRH22128	Soybean	plastid	49.87	48.84
KRH27215	Soybean	cytosol	49.34	48.21
PGSC0003DMT400033347	Potato	cytosol	48.03	45.86
PGSC0003DMT400057642	Potato	cytosol	47.51	44.91
Solyc10g009010.2.1	Tomato	cytosol	46.19	44.78
PGSC0003DMT400058761	Potato	mitochondrion	45.93	44.53
Solyc02g078480.2.1	Tomato	cytosol	47.24	44.44
Solyc03g006470.2.1	Tomato	cytosol	45.93	43.75
GSMUA_AchrUn_...	Banana	cytosol, plastid	43.83	42.82
GSMUA_Achr1P17630_001	Banana	cytosol	43.57	42.56
GSMUA_Achr3P14310_001	Banana	cytosol	40.68	41.22
GSMUA_Achr11P...	Banana	cytosol	40.68	40.05
GSMUA_Achr2P18550_001	Banana	cytosol	39.63	38.72
Os10t0499400-01	Rice	cytosol, endoplasmic reticulum	28.35	38.3
Zm00001d013933_P001	Maize	cytosol, plastid	37.01	37.7
Zm00001d032560_P001	Maize	plastid	36.48	37.07
KXG38242	Sorghum	plastid	37.01	37.01
TraesCS1B01G187200.1	Wheat	plastid	35.43	36.19
TraesCS1A01G170000.1	Wheat	plastid	35.43	36.19
TraesCS1D01G167600.1	Wheat	plastid	35.17	35.92
TraesCS6D01G218300.1	Wheat	plastid	34.65	34.29
TraesCS6B01G264200.1	Wheat	plastid	34.38	33.76
EES05487	Sorghum	plastid	35.7	33.33
HORVU6Hr1G060370.2	Barley	plastid	34.38	33.16
TraesCS6A01G235600.1	Wheat	plastid	33.86	32.99
TraesCS2A01G586700.1	Wheat	cytosol, peroxisome, plastid	32.55	32.63
Zm00001d017375_P001	Maize	plastid	34.65	31.88
TraesCSU01G021400.1	Wheat	cytosol	31.23	31.15
TraesCS2D01G599900.1	Wheat	cytosol	30.97	30.89
HORVU2Hr1G118660.1	Barley	cytosol, extracellular, mitochondrion, plastid	17.06	28.89
HORVU1Hr1G044960.1	Barley	mitochondrion, plastid	35.17	27.74
Os04t0679600-01	Rice	nucleus	25.2	23.76
KRH40331	Soybean	cytosol, nucleus	24.67	22.12
KRH00904	Soybean	cytosol	23.62	21.18

Protein Annotations

EMBL:ACUP02009162	EnsemblPlants:KRH10848	EnsemblPlantsGene:GLYMA_15G072600	InterPro:CBS_dom	InterPro:IPR000644	PANTHER:PTHR13780
PANTHER:PTHR13780:SF55	PFAM:PF00571	PFscan:PS51371	ProteinID:KRH10848	ProteinID:KRH10848.1	SEG:seg
SUPFAM:SSF54631	UniParc:UPI000294E30D	UniProt:I1MEG8	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr15:+:5560760..5563018

Molecular Weight (calculated)

41675.9 Da

IEP (calculated)

4.854

GRAVY (calculated)

0.049

Length

381 amino acids

Sequence
(BLAST)

001: MAARLSGHEL SDLCLGKPPL RALSVRDTVA DALAALKRID DTYVSVWNCN HSFIRKQQPQ IQSQNQCCCT CIGKVCMLDI ICFLSKPQSL SSPSAALHSP
101: ISAALQDNSA VLVLHLPPSA SLLEAIDVMQ EGVQNLVIPI QNQVESLDSN NVHHNNNTTY CWLTQEDVLR YLLNSIGVID TKNLFAVCYD DPASSILDLL
201: ALSLIYQSSV AIVDPNGKFG GEISPVMLNS YDESVVPAIA TLSAGDLTAY IDCGGPPEDL VQLVKERVKE KVEEQNMLEL LGDETTRTGL TSWSSFSSSC
301: SSDEEFCSGK NWKLGGYSAR VGRRSEAIVC HRWSSLVAVM IQALSHRVSY VWVVEEDGTL TGIVTFQGML KVFRDHLKSM C

Best Arabidopsis Sequence Match ( AT5G53750.1 )
(BLAST)

001: MALTLLSHEL SDLCIGKPPL RCLSVATATV ADAIAALKSS DEPFLTVWSC NHDEKTDDND KCECLGKICM ADVICYLSKF DNNVLSLSSA FDASVSVLLP
101: KSRALVVHVQ SSCSLIEAID LIIKGAQNLI VPIHTKSITK RRQQQKLLKR NVVVSLTNAT STTHKNSREF CWITQEDIIR FLLDSISVFS PLPSLSISDL
201: GVINSTHTIL AVDYYSSAAS AVSAISRAIL DNVSVAVVGK GCDQEDPCMV LIGEISPMTL ACCDETAVAA VATLSAGDLM SYIDGSGPPE SLVGVVRNRL
301: EDKGMVGLIS LIDSLSLSSG SSSDEESPAG KTRMTSSYGR SVSSAARMAR KSVAIVCNRK SSLMAVMIQA IAHRVSYVWV IDEDGCLIGM VTFVDILKLF
401: REFLDDEN

Arabidopsis Description

CBS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JXB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.