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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
TargetP:secretory
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G156400.1 Wheat plastid 91.36 81.39
TraesCS7D01G259800.1 Wheat plastid 89.97 80.15
TraesCS7A01G258900.1 Wheat plastid 89.69 79.9
TraesCSU01G217700.1 Wheat plastid 89.69 79.9
TraesCSU01G218600.1 Wheat plastid 89.69 79.9
Os08t0529200-00 Rice plastid 65.18 55.98
Zm00001d031600_P001 Maize plastid 61.0 55.44
EES14199 Sorghum plastid 61.28 55.42
HORVU3Hr1G094090.2 Barley cytosol 44.57 39.9
HORVU2Hr1G118660.1 Barley cytosol, extracellular, mitochondrion, plastid 13.09 20.89
HORVU6Hr1G060370.2 Barley plastid 21.17 19.24
HORVU1Hr1G044960.1 Barley mitochondrion, plastid 22.01 16.36
Protein Annotations
EnsemblPlants:HORVU7Hr1G053840.1EnsemblPlantsGene:HORVU7Hr1G053840Gene3D:3.10.580.10InterPro:CBS_domInterPro:IPR000644PANTHER:PTHR13780
PANTHER:PTHR13780:SF57PFAM:PF00571PFscan:PS51371SEG:segSUPFAM:SSF54631UniParc:UPI000B479394
UniProt:A0A287WJ74MapMan:35.1::::
Description
No Description!
Coordinates
chrchr7H:+:211559258..211561029
Molecular Weight (calculated)
38013.0 Da
IEP (calculated)
8.587
GRAVY (calculated)
0.134
Length
359 amino acids
Sequence
(BLAST)
001: AVWRDGASPL APLAATVVGL LSSLDVVAFI ASHARGGGTA AEAMRTPAGD VVPREPALVR EVEPDARLIE IMELMKQGAK RVLVRKNITE GCPINKQPFA
101: PFYKAAPKIT GTPRAAATQT MSRSWSSSTF GCDKYCCLTR EDIVRFLINC LGSLAPIPLQ SISSLGAISH GYCHVDASSP AIEVVWRIPS DPRAVAVVRT
201: NRDGSHVILG EISAHKLWKR DPVAAADAMA RLSALHFATG IDENGAAPAA ANGVGVGARR GEVENDIVPS PRSMRFSSRR IGFSACLASQ MVPSHRKNTV
301: LTCNSESSLA AVMAQMLAHR ATHLWVVQGG DTEEAILVGM VGYMDIFNAV TSGVLVLPA
Best Arabidopsis Sequence Match ( AT5G53750.1 )
(BLAST)
001: MALTLLSHEL SDLCIGKPPL RCLSVATATV ADAIAALKSS DEPFLTVWSC NHDEKTDDND KCECLGKICM ADVICYLSKF DNNVLSLSSA FDASVSVLLP
101: KSRALVVHVQ SSCSLIEAID LIIKGAQNLI VPIHTKSITK RRQQQKLLKR NVVVSLTNAT STTHKNSREF CWITQEDIIR FLLDSISVFS PLPSLSISDL
201: GVINSTHTIL AVDYYSSAAS AVSAISRAIL DNVSVAVVGK GCDQEDPCMV LIGEISPMTL ACCDETAVAA VATLSAGDLM SYIDGSGPPE SLVGVVRNRL
301: EDKGMVGLIS LIDSLSLSSG SSSDEESPAG KTRMTSSYGR SVSSAARMAR KSVAIVCNRK SSLMAVMIQA IAHRVSYVWV IDEDGCLIGM VTFVDILKLF
401: REFLDDEN
Arabidopsis Description
CBS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JXB6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.