Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G156400.1 | Wheat | plastid | 91.36 | 81.39 |
TraesCS7D01G259800.1 | Wheat | plastid | 89.97 | 80.15 |
TraesCS7A01G258900.1 | Wheat | plastid | 89.69 | 79.9 |
TraesCSU01G217700.1 | Wheat | plastid | 89.69 | 79.9 |
TraesCSU01G218600.1 | Wheat | plastid | 89.69 | 79.9 |
Os08t0529200-00 | Rice | plastid | 65.18 | 55.98 |
Zm00001d031600_P001 | Maize | plastid | 61.0 | 55.44 |
EES14199 | Sorghum | plastid | 61.28 | 55.42 |
HORVU3Hr1G094090.2 | Barley | cytosol | 44.57 | 39.9 |
HORVU2Hr1G118660.1 | Barley | cytosol, extracellular, mitochondrion, plastid | 13.09 | 20.89 |
HORVU6Hr1G060370.2 | Barley | plastid | 21.17 | 19.24 |
HORVU1Hr1G044960.1 | Barley | mitochondrion, plastid | 22.01 | 16.36 |
Protein Annotations
EnsemblPlants:HORVU7Hr1G053840.1 | EnsemblPlantsGene:HORVU7Hr1G053840 | Gene3D:3.10.580.10 | InterPro:CBS_dom | InterPro:IPR000644 | PANTHER:PTHR13780 |
PANTHER:PTHR13780:SF57 | PFAM:PF00571 | PFscan:PS51371 | SEG:seg | SUPFAM:SSF54631 | UniParc:UPI000B479394 |
UniProt:A0A287WJ74 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:211559258..211561029
Molecular Weight (calculated)
38013.0 Da
IEP (calculated)
8.587
GRAVY (calculated)
0.134
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: AVWRDGASPL APLAATVVGL LSSLDVVAFI ASHARGGGTA AEAMRTPAGD VVPREPALVR EVEPDARLIE IMELMKQGAK RVLVRKNITE GCPINKQPFA
101: PFYKAAPKIT GTPRAAATQT MSRSWSSSTF GCDKYCCLTR EDIVRFLINC LGSLAPIPLQ SISSLGAISH GYCHVDASSP AIEVVWRIPS DPRAVAVVRT
201: NRDGSHVILG EISAHKLWKR DPVAAADAMA RLSALHFATG IDENGAAPAA ANGVGVGARR GEVENDIVPS PRSMRFSSRR IGFSACLASQ MVPSHRKNTV
301: LTCNSESSLA AVMAQMLAHR ATHLWVVQGG DTEEAILVGM VGYMDIFNAV TSGVLVLPA
101: PFYKAAPKIT GTPRAAATQT MSRSWSSSTF GCDKYCCLTR EDIVRFLINC LGSLAPIPLQ SISSLGAISH GYCHVDASSP AIEVVWRIPS DPRAVAVVRT
201: NRDGSHVILG EISAHKLWKR DPVAAADAMA RLSALHFATG IDENGAAPAA ANGVGVGARR GEVENDIVPS PRSMRFSSRR IGFSACLASQ MVPSHRKNTV
301: LTCNSESSLA AVMAQMLAHR ATHLWVVQGG DTEEAILVGM VGYMDIFNAV TSGVLVLPA
001: MALTLLSHEL SDLCIGKPPL RCLSVATATV ADAIAALKSS DEPFLTVWSC NHDEKTDDND KCECLGKICM ADVICYLSKF DNNVLSLSSA FDASVSVLLP
101: KSRALVVHVQ SSCSLIEAID LIIKGAQNLI VPIHTKSITK RRQQQKLLKR NVVVSLTNAT STTHKNSREF CWITQEDIIR FLLDSISVFS PLPSLSISDL
201: GVINSTHTIL AVDYYSSAAS AVSAISRAIL DNVSVAVVGK GCDQEDPCMV LIGEISPMTL ACCDETAVAA VATLSAGDLM SYIDGSGPPE SLVGVVRNRL
301: EDKGMVGLIS LIDSLSLSSG SSSDEESPAG KTRMTSSYGR SVSSAARMAR KSVAIVCNRK SSLMAVMIQA IAHRVSYVWV IDEDGCLIGM VTFVDILKLF
401: REFLDDEN
101: KSRALVVHVQ SSCSLIEAID LIIKGAQNLI VPIHTKSITK RRQQQKLLKR NVVVSLTNAT STTHKNSREF CWITQEDIIR FLLDSISVFS PLPSLSISDL
201: GVINSTHTIL AVDYYSSAAS AVSAISRAIL DNVSVAVVGK GCDQEDPCMV LIGEISPMTL ACCDETAVAA VATLSAGDLM SYIDGSGPPE SLVGVVRNRL
301: EDKGMVGLIS LIDSLSLSSG SSSDEESPAG KTRMTSSYGR SVSSAARMAR KSVAIVCNRK SSLMAVMIQA IAHRVSYVWV IDEDGCLIGM VTFVDILKLF
401: REFLDDEN
Arabidopsis Description
CBS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JXB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.