Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G156400.1 | Wheat | plastid | 65.07 | 67.49 |
| TraesCS7D01G259800.1 | Wheat | plastid | 65.07 | 67.49 |
| TraesCS7A01G258900.1 | Wheat | plastid | 64.35 | 66.75 |
| TraesCSU01G217700.1 | Wheat | plastid | 64.35 | 66.75 |
| TraesCSU01G218600.1 | Wheat | plastid | 64.35 | 66.75 |
| HORVU7Hr1G053840.1 | Barley | golgi | 55.98 | 65.18 |
| Zm00001d031600_P001 | Maize | plastid | 58.85 | 62.28 |
| EES14199 | Sorghum | plastid | 59.09 | 62.22 |
| Os01t0920000-01 | Rice | cytosol, plasma membrane | 37.32 | 40.62 |
| Os10t0499400-01 | Rice | cytosol, endoplasmic reticulum | 15.79 | 23.4 |
| Os04t0679600-01 | Rice | nucleus | 15.31 | 15.84 |
Protein Annotations
| EnsemblPlants:Os08t0529200-00 | EnsemblPlantsGene:Os08g0529200 | Gene3D:3.10.580.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0020037 |
| InterPro:CBS_dom | InterPro:Cyt_B5_heme-BS | InterPro:IPR000644 | PANTHER:PTHR13780 | PANTHER:PTHR13780:SF57 | PFAM:PF00571 |
| PFscan:PS51371 | ProteinID:BAD09107.1 | ProteinID:BAF24233.1 | ProteinID:BAT06376.1 | ScanProsite:PS00191 | SEG:seg |
| SUPFAM:SSF54631 | UniParc:UPI000023AD13 | UniProt:Q6ZIB3 | MapMan:35.1 | : | : |
Description
Cystathionine beta-synthase, core domain containing protein. (Os08t0529200-00)
Coordinates
chr8:-:26344808..26347223
Molecular Weight (calculated)
43468.6 Da
IEP (calculated)
9.997
GRAVY (calculated)
0.141
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHIVFLRAS AADLTAGKPP LAGVPASAPL SAAAAAIPAS SEAAVAVWRV DGASHHHHHR APTAAATVVG LLSSIDVVAF LANHPGGAAA AFMTPAGDVV
101: PHEHALVRQV QPDTRLIEIV ELMKQGARRV LVGKNIKEGC AINKQPFAPF YKAVLKITGT PRRNPSPSPS PATRSPSTTL GRDRYCCLTR EDIVRFLINC
201: LGALAPIPMQ SIASLGAISR AYSHVEDSSP AIGAAWELPS DPRAVAVVRT GHDGSRVILG EISGHKLWKK DYAAAAEAMA TMSAMDFATG VDESGPSPTA
301: TAAAAAGNVG GGGARARMGS VEEEIAPVPR LTRFSSRKIG FSASLANMIM VSHRKNRVLT CKATSSLAAV MAQMLSHRAT HLWVVEDGDA DKGAVLVGMI
401: GYMEILRAVT RGVVVPPA
101: PHEHALVRQV QPDTRLIEIV ELMKQGARRV LVGKNIKEGC AINKQPFAPF YKAVLKITGT PRRNPSPSPS PATRSPSTTL GRDRYCCLTR EDIVRFLINC
201: LGALAPIPMQ SIASLGAISR AYSHVEDSSP AIGAAWELPS DPRAVAVVRT GHDGSRVILG EISGHKLWKK DYAAAAEAMA TMSAMDFATG VDESGPSPTA
301: TAAAAAGNVG GGGARARMGS VEEEIAPVPR LTRFSSRKIG FSASLANMIM VSHRKNRVLT CKATSSLAAV MAQMLSHRAT HLWVVEDGDA DKGAVLVGMI
401: GYMEILRAVT RGVVVPPA
001: MASVFLYHVV GDLTVGKPEM VEFYETETVE SAIRAIGEST ECGIPVWRKR TTPSLPGFVE NSEMRQQRFV GILNSLDIVA FLAKTECLQE EKAMKIPVSE
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
101: VVSPDNTLLK QVDPGTRLID ALEMMKQGVR RLLVPKSVVW RGMSKRFSIL YNGKWLKNSE NSSSSSGLSA DSTNRPTTSM TSSRDKFCCL SREDVIRFLI
201: GVLGALAPLP LTSISTLGII NQNYNFIEAS LPAIEATRRP LCDPSAIAVL EQTENEQQFK IIGEISASKL WKCDYLAAAW ALANLYAGQF VMGVEDNMSS
301: RSFSDFLQTS FPGGEQNGTA TNAKKFSSRS IGFNPTSPTR LSIGRSMYRG RSAPLTCKTS SSLAAVMAQM LSHRATHVWV TEADSDDVLV GVVGYGEILT
401: AVTKQPSAFV PSNRSYEGFG NENQS
Arabidopsis Description
CBSX6CBS domain-containing protein CBSX6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.