Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0640401-00 | Rice | nucleus | 32.0 | 36.92 |
| VIT_05s0077g01180.t01 | Wine grape | nucleus | 68.0 | 19.54 |
| Zm00001d022296_P001 | Maize | nucleus | 56.0 | 18.92 |
| Zm00001d006930_P001 | Maize | nucleus | 57.33 | 16.1 |
| Os11t0199600-02 | Rice | nucleus | 57.33 | 15.75 |
| KXG36793 | Sorghum | nucleus | 56.0 | 15.61 |
| HORVU7Hr1G097780.1 | Barley | nucleus | 54.67 | 15.41 |
| TraesCS7D01G415100.1 | Wheat | nucleus | 54.67 | 15.41 |
| TraesCS7A01G422700.1 | Wheat | nucleus | 54.67 | 15.36 |
| TraesCS7B01G323100.1 | Wheat | nucleus | 54.67 | 15.36 |
| TraesCS5A01G022300.1 | Wheat | nucleus | 53.33 | 15.33 |
Protein Annotations
| ArrayExpress:VIT_07s0151g01090 | EMBL:FN595253 | EnsemblPlants:VIT_07s0151g01090.t01 | EnsemblPlantsGene:VIT_07s0151g01090 | ProteinID:CCB48294 | ProteinID:CCB48294.1 |
| SEG:seg | UniParc:UPI0002109830 | UniProt:F6H7V2 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7_random:+:1286787..1287152
Molecular Weight (calculated)
8072.4 Da
IEP (calculated)
8.510
GRAVY (calculated)
-0.852
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSKKEEKAQ AVAERIKVAG LTTAKGLSRV QAERAATTAA RNVNAYGQKE EDPCRWQEMG ADVSGRPSIQ EDHGA
001: MSNSKDEKSQ DAADRIKAAT LTAAKGLSRT QAERAAAAAA RNVNAYGQKE EGPSRWQEKR ELKRQMYLMS TEKAVRLGER KDKTMSASAV GSSASAASQC
101: QKCFQAGHWT YECKNERVYI SRPSRTQQLK NPKLRTKPSV DDLDGSDDDD EEERPDATNG KAEVEKRSKK SKRKHRSKSD SESDSEASVF ETDSDGSSGE
201: SSSEYSSSSD SEDERRRRRK AKKSKKKQKQ RKERRRRYSS SSSESSESES ASDSDSDEDR SRRKKKSKRH SNKRR
101: QKCFQAGHWT YECKNERVYI SRPSRTQQLK NPKLRTKPSV DDLDGSDDDD EEERPDATNG KAEVEKRSKK SKRKHRSKSD SESDSEASVF ETDSDGSSGE
201: SSSEYSSSSD SEDERRRRRK AKKSKKKQKQ RKERRRRYSS SSSESSESES ASDSDSDEDR SRRKKKSKRH SNKRR
Arabidopsis Description
At5g49400 [Source:UniProtKB/TrEMBL;Acc:Q6NMK2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.