Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 18.2 | 27.65 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 43.89 | 25.4 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 43.89 | 24.79 |
| VIT_18s0001g05380.t01 | Wine grape | plastid | 41.65 | 23.62 |
| VIT_00s0304g00060.t01 | Wine grape | plastid | 40.9 | 23.0 |
| VIT_11s0037g01020.t01 | Wine grape | cytosol | 12.47 | 20.49 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100261370 | wikigene:100261370 | MapMan:35.1 | EMBL:AM456377 | ProteinID:CAN63390 |
| ProteinID:CAN63390.1 | ProteinID:CBI30462 | ProteinID:CBI30462.3 | ncoils:Coil | UniProt:D7THE6 | EMBL:FN595991 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| EntrezGene:LOC100261370 | wikigene:LOC100261370 | PFAM:PF13431 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 |
| PANTHER:PTHR22904:SF360 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI0001BE357F | ArrayExpress:VIT_08s0007g01480 | EnsemblPlantsGene:VIT_08s0007g01480 | EnsemblPlants:VIT_08s0007g01480.t01 | RefSeq:XP_002273257 | RefSeq:XP_002273257.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:15578905..15581583
Molecular Weight (calculated)
44879.7 Da
IEP (calculated)
8.631
GRAVY (calculated)
-0.471
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGVKNVENL SNVCEVSRSK ALAEKPNCRV VPHFESVEKL KNAGNQEYRR GRYMEAISFY DKAIALNCQN AACHNNKAAA LAGLGKFTEA VGECLQAINC
101: DPSYSRAHYR LGTLYTRLGR VNEAKWHVKL SGHDLGSEAM QRLLHLEVHL TNMQKARKVQ DWDHVLKEST LSIEAGADAS NQVLAAKAEA LLKLHRAKEA
201: LELLMDEKNS EESKSRKAGE EAQCLLIIET QINLYLGRFE EGVLAAEQAV NLHSSSKSLM WLRKARGVAD ARKAGNEFYK TGKYLEACSV YGQGLQHDPT
301: NCVLLCNRAA CRSKLGQWET AIDDCNAALR NRPDYSKALL RRAYSNVRLE RWEESLRDYS VLSKEMPGDH VIADALLQVQ MELKKAKGAG AYNIELWPLR
401: S
101: DPSYSRAHYR LGTLYTRLGR VNEAKWHVKL SGHDLGSEAM QRLLHLEVHL TNMQKARKVQ DWDHVLKEST LSIEAGADAS NQVLAAKAEA LLKLHRAKEA
201: LELLMDEKNS EESKSRKAGE EAQCLLIIET QINLYLGRFE EGVLAAEQAV NLHSSSKSLM WLRKARGVAD ARKAGNEFYK TGKYLEACSV YGQGLQHDPT
301: NCVLLCNRAA CRSKLGQWET AIDDCNAALR NRPDYSKALL RRAYSNVRLE RWEESLRDYS VLSKEMPGDH VIADALLQVQ MELKKAKGAG AYNIELWPLR
401: S
001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS
Arabidopsis Description
TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.