Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99262 | Canola | cytosol | 46.34 | 4.15 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 85.37 | 4.01 |
| VIT_16s0098g01630.t01 | Wine grape | plastid | 75.61 | 3.26 |
| VIT_18s0001g00910.t01 | Wine grape | cytosol | 12.2 | 0.56 |
| VIT_03s0038g02830.t01 | Wine grape | cytosol | 12.2 | 0.56 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.2 | InterPro:ARM-like | ProteinID:CCB61494 | ProteinID:CCB61494.1 | UniProt:F6I3H6 |
| EMBL:FN596741 | GO:GO:0000060 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 | GO:GO:0006607 |
| GO:GO:0006610 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008139 | GO:GO:0008150 | GO:GO:0008565 |
| GO:GO:0016020 | GO:GO:0031965 | GO:GO:0034399 | InterPro:IPR011989 | InterPro:KPNB1_plant | PANTHER:PTHR10527 |
| PANTHER:PTHR10527:SF44 | UniParc:UPI00021088E2 | ArrayExpress:VIT_10s0092g00320 | EnsemblPlantsGene:VIT_10s0092g00320 | EnsemblPlants:VIT_10s0092g00320.t01 | : |
Description
No Description!
Coordinates
chr10:-:11855358..11855669
Molecular Weight (calculated)
4830.9 Da
IEP (calculated)
4.857
GRAVY (calculated)
0.007
Length
41 amino acids
Sequence
(BLAST)
(BLAST)
1: MHEEAMLVVD ALAYATGPKF GKYMVEFHKY LEMGLKIFEE Y
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RSVPCGLKI
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RSVPCGLKI
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.